Mycoplasmopsis columbina: NCTC10178_00283
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Entry
NCTC10178_00283 CDS
T06777
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
mcom
Mycoplasmopsis columbina
Brite
KEGG Orthology (KO) [BR:
mcom00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NCTC10178_00283 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcom03021
]
NCTC10178_00283 (rpoD)
Transcription machinery [BR:
mcom03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NCTC10178_00283 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r1_2
Sigma70_r4
HrpJ
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
VEU76865
LinkDB
All DBs
Position
1:278715..280247
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AA seq
510 aa
AA seq
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MAKSTKKIDSNLETVISMIENHAKNNNKTSVTQEEVYEYLDKVQIEILDEQMDDVFETLM
QRGILNEDSDEGDLDDVFYEDFEAEGISLDKNIDTEEIELDEDYEDDDEKSSKNKDKKRK
DDEDYDSGYDSEVASYLGDVEFDSDYDDEDYSYDDDDDYSDESSYAEEEEEIEEEDLKAK
KSKKKTTEIYELEEFDDDNITLVDEGSRKSAKELRNKLTETQDIVKWYMRWIGKYGKLLT
KEEEEKLAKEMDKGGFRGKRARDKLIKRNLRLVINNAKKYKNRGLSFIDLISEGNSGIVK
AVQKYNVETGFKFSTYATWWIRQAITRAVADQARTIRVPVHMVETINKISKIERELQQEL
GREPLDSEIAERYGNNYTAEKVRYIRKINIDPISLDKQIGKENDSSFSDFVKDETVINPT
DFAAGEELVENLNRILKDSLDEDEYVLICKRYGVGENPEDNNNKYRLHTLDELAQERGVS
KERIRQIENKILKKIKNNPKSSRLLKDFLK
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaagtactaaaaaaatagattcgaatttagaaacagttattagcatgattgaa
aaccatgctaaaaataataataaaaccagtgttactcaagaagaagtttatgaatatcta
gacaaagttcaaattgaaattttagatgaacaaatggatgatgtttttgaaactttaatg
caaagaggcattttaaacgaagatagcgacgaaggcgatttggatgatgtcttttatgaa
gattttgaagctgagggtatttctttagataaaaacattgatactgaagaaattgaatta
gatgaagattatgaagatgatgatgaaaaatcatcaaaaaacaaagataaaaaaagaaaa
gatgatgaagactatgattcaggttatgattctgaagtagctagttatcttggtgatgtg
gaatttgactctgattatgatgatgaagattattcttacgacgatgatgacgattattct
gacgaaagcagttatgctgaagaggaagaagaaattgaggaagaagacttaaaagctaaa
aaaagcaagaaaaaaacaacagaaatctatgagttagaagaatttgatgatgacaatatt
actttagttgacgagggttcaaggaaaagtgccaaagaattaagaaacaaattaactgaa
acacaagatattgttaagtgatatatgcgttgaattggaaagtatggaaaattacttacc
aaagaagaagaagaaaaactggctaaagaaatggacaagggtggttttagaggcaaaaga
gctcgtgataaattaatcaaaagaaatcttagattagttattaataatgctaaaaaatat
aaaaatagaggtttaagtttcattgatttaatttccgaaggaaatagtggaattgttaaa
gcggttcaaaaatataatgttgagaccggatttaaattttcaacttatgcaacttgatga
attcgccaagcgattactcgtgctgttgccgatcaagctagaactattcgtgtgccagtt
cacatggttgaaactatcaataaaatttcaaaaattgagagagaattgcaacaagaatta
ggacgtgaaccacttgatagtgaaattgcagaaagatacggaaacaactatactgctgaa
aaagtaagatacattagaaaaatcaatatagatccaatttcattagataaacaaattggt
aaagaaaacgattcatcatttagtgactttgttaaagatgaaactgttattaatccaact
gattttgctgctggtgaagaattggtagaaaatctaaatcggattttaaaggattcgcta
gatgaagatgaatatgttcttatttgtaaacgttatggagttggggaaaaccctgaagat
aataacaacaagtatagattgcacactttagatgaattagctcaagaacgtggagtttca
aaagaaagaattcgtcaaattgaaaacaaaattttgaaaaaaatcaaaaacaatcctaaa
agttctcgtttattgaaagactttttaaaataa
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