Mycoplasmopsis columbina: NCTC10178_00318
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Entry
NCTC10178_00318 CDS
T06777
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mcom
Mycoplasmopsis columbina
Brite
KEGG Orthology (KO) [BR:
mcom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mcom03016
]
NCTC10178_00318 (truB)
Enzymes [BR:
mcom01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NCTC10178_00318 (truB)
Transfer RNA biogenesis [BR:
mcom03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NCTC10178_00318 (truB)
Prokaryotic type
NCTC10178_00318 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
VEU76897
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All DBs
Position
1:340606..341463
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AA seq
285 aa
AA seq
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MFYLLHKKRGESSFQAIKKFAKDQKILKVGHTGTLDLFATGLLLVATDEDTKLISYIADK
NKTYEAEIKFGSQTDTYDLEGEIINYSTNKIEEKDLIKIIEWLEVQNSQIPPIYSAKKID
GIRSYELARKKIKVDLKPQKIKVENVKIEKFNFDEQTLKIALSVSNGTFIRSLANDLAIA
FNTYGHLISLKRIIISDFNISLLNNKEFVKIENAPAFAISTIFLAAKEIKKLKNGFSVKT
FLDLKNNEEYLIADEESKANILGIVYFKDNEIKVKKLFGNKLTKY
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgttttatttacttcataaaaaaagaggagaatcttcttttcaagcaattaaaaaattt
gcaaaagatcagaaaattttaaaagttggtcatactggaactttggacctttttgcaaca
ggattattacttgtggcaaccgatgaagacacaaaattaatttcctatattgcagataaa
aataaaacatatgaggcggaaattaaatttggatctcagactgatacttatgatcttgag
ggtgagataattaattattcaaccaataaaatagaagaaaaagacttaataaaaattatt
gaatgattagaagttcaaaatagtcaaattcctcctatttatagtgccaaaaagattgat
ggcataagaagttatgaactagcaagaaaaaaaataaaagttgacttaaaacctcaaaaa
ataaaagttgaaaacgtcaaaattgaaaaatttaattttgacgaacaaaccttaaaaata
gctctatccgtgtcaaatggaacttttattcgttcacttgctaatgatttagcaattgct
tttaatacttacggacatttaattagtttaaagcgaataataatttccgattttaatatt
tcacttttgaataataaagaatttgttaaaattgaaaatgcacccgcttttgcaatttcc
acaatttttcttgctgctaaagagataaaaaaattaaaaaatggctttagtgtaaaaact
tttttagatttgaaaaataatgaagaatatctaattgcagatgaagaaagtaaagcaaat
attttaggtattgtttattttaaagataatgaaataaaagtaaaaaaattgtttggaaat
aaattaacaaagtattaa
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