Mycoplasmopsis columbina: NCTC10178_00395
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Entry
NCTC10178_00395 CDS
T06777
Symbol
dppD_oppD
Name
(GenBank) ABC-type dipeptide/oligopeptide/nickel transport system ATP-binding protein (DppD/OppD)
KO
K15583
oligopeptide transport system ATP-binding protein
Organism
mcom
Mycoplasmopsis columbina
Pathway
mcom02010
ABC transporters
mcom02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mcom00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NCTC10178_00395 (dppD_oppD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NCTC10178_00395 (dppD_oppD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NCTC10178_00395 (dppD_oppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mcom02000
]
NCTC10178_00395 (dppD_oppD)
Transporters [BR:
mcom02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
NCTC10178_00395 (dppD_oppD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
Hpr_kinase_C
AAA_16
Motif
Other DBs
NCBI-ProteinID:
VEU76972
LinkDB
All DBs
Position
1:complement(486038..487180)
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AA seq
380 aa
AA seq
DB search
MKQEQNLNYETKNNTSATERFYDKIRTTPLTDNKVLEVRNLHVSFSTGWKKTIHIVRGLD
LDVYKGQIVGLVGESGSGKSVTSKTLINVNHNGIITADKIQIDDLELTKIKRQSHWQFIR
GKKIGYIPQDPLTSLNPTRTIGKQLLDALNTNSEWKNKKYTEKREYLIGLLKQFGLRNAD
AIFKAYPHTLSGGMKQRIVITMVVALKPDVIIADEPTTALDPTVQASVLSLFESIRQQYN
IAIILISHNISVIAKFCDYIYVMYAGRIVERGTKKEIFTQPAHPYTWALISAIPETKDEK
LFNIKGTPPDMANLPLGDPFAPRNDYALEIDFIKEPPLIPITKTHSAATWLLHPDAPKVT
LSDDLLKRLKLFKDAFKDYE
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaagaacaaaatcttaattatgaaactaaaaataacacatctgctacagagcgt
ttctatgacaaaattagaaccactccgttaacagataataaagttttagaagtaagaaat
ttgcacgtaagtttctcaacaggttgaaagaaaactattcacattgtacgtggtttagat
ttagatgtgtataaaggtcaaattgttggtttagttggtgaatccggttcaggtaaatcg
gttacttcaaaaacattaattaatgtaaatcacaatggaattattactgctgataaaatt
caaattgatgatttagaattaactaaaattaaaagacaaagtcattgacaatttattcgt
ggtaaaaaaattggctatattccacaagatccacttacttcattaaatccaacaagaaca
attggtaaacaattacttgatgcattaaatactaacagtgagtgaaaaaacaaaaaatac
accgaaaaaagggaatatcttattggtttacttaaacaatttggtttaagaaatgctgat
gctattttcaaagcttatccacacactctttctggtggaatgaaacagagaattgttatt
accatggtagtagcacttaaaccagatgtgatcattgctgatgaacctaccactgcactt
gatccaactgtgcaagcttctgtactttctctctttgaaagtattagacagcaatacaat
attgcaattattttaattagtcacaacatttcagttattgctaaattctgtgattacatt
tatgtaatgtatgcaggtagaattgtggaaagaggaacaaaaaaagaaattttcacccaa
ccagcacatccttacacatgagcattaatttcagctattcctgaaactaaagatgaaaaa
ttatttaacattaaaggaactccaccagatatggctaatttgccattaggtgatcctttt
gctccacgtaatgattatgctttagaaattgattttattaaagaacctccacttattcca
attaccaaaacacatagtgctgcaacttgattattacatccagatgcgccaaaagttact
ctctcagatgatttattaaaacgtttaaaattatttaaggatgcctttaaagattatgaa
taa
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