Mycoplasmopsis columbina: NCTC10178_00410
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Entry
NCTC10178_00410 CDS
T06777
Symbol
dnaX
Name
(GenBank) DNA-directed DNA polymerase
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
mcom
Mycoplasmopsis columbina
Pathway
mcom03030
DNA replication
mcom03430
Mismatch repair
mcom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC10178_00410 (dnaX)
03430 Mismatch repair
NCTC10178_00410 (dnaX)
03440 Homologous recombination
NCTC10178_00410 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcom03032
]
NCTC10178_00410 (dnaX)
03400 DNA repair and recombination proteins [BR:
mcom03400
]
NCTC10178_00410 (dnaX)
Enzymes [BR:
mcom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC10178_00410 (dnaX)
DNA replication proteins [BR:
mcom03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC10178_00410 (dnaX)
DNA repair and recombination proteins [BR:
mcom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC10178_00410 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
RuvB_N
AAA_22
AAA_5
AAA_2
AAA_24
AAA_14
AAA_19
AAA_30
TIP49
AAA_assoc_2
Mg_chelatase
AAA_16
AAA_7
AAA_17
AAA_18
Pribosyl_synth
Sigma54_activ_2
ResIII
Viral_helicase1
Rep_fac_C
Motif
Other DBs
NCBI-ProteinID:
VEU76987
LinkDB
All DBs
Position
1:503158..505101
Genome browser
AA seq
647 aa
AA seq
DB search
MSYKALYRKYRPQVFDEVQGQDHIIQTLKNAIKNNKISHAYLFSGPRGVGKTSIAKIFAN
VLNCVHTIENFDVCDDCIKNTENNLDIIEMDAASNNGVDDIRKLQEKIEHLPSNGKYKVY
IIDEVHMLSKGAFNALLKTLEEPPVHVIFILATTDPQKIPLTVLSRLQRHNFKKITSKTI
AKQIKKVFDLEAIKYEDEAINYISRLAQGGMRDALSISEQAIAYGNGKVTLEDIINSFGV
VSNETLIEIINNLSLGKIKKVLETFNNLKNDGIDPEQFVYSLFGILEDYIVFKNTYNHEL
LEYLNLEQIENLEWELDYSTNCLDLIFKLMKELKYSETPFQLIEIYLLKMMNKNANPTTT
IKEMQTTIKENKTNNELLIEGTIKEMKHNENTENKEKNTKETNLISDNLQEEKNVSTQNL
NVNDILEQSQEFVLESQDHQEDQNTIENDLLSFEDQYVDDGLISSAEFSIDNKESIENDM
PIPTLAKYKNTIVFEDYLNKEKIEQILRNSTLNLNKMDKTISALNFMVSDRNYKDLIEVL
NNLKLISAGEKHLLFYGNSKTNLAYLQYIKENAYNSNIQNFIKDYFGSYKHLYVVSRRQK
ELLFELDSKFAQESKNNVKTKAEELEDVVLEKTKTMTESLYEKLLKF
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtcatacaaagctttatatcgtaaatatagaccacaagtttttgatgaagtccaagga
caagatcacatcattcaaacattaaaaaatgcaattaaaaataataaaatcagtcatgct
tatttatttagtggaccaagaggagtaggtaaaacatcaattgccaaaatttttgcaaat
gttttaaattgtgttcatacaattgaaaattttgatgtatgtgacgactgtataaaaaat
actgaaaataatttagatattatcgaaatggatgctgcttcaaataacggagtagatgac
attagaaaattacaagaaaaaatagaacatcttccaagcaatggaaaatataaagtctat
attattgatgaagttcatatgttatcaaaaggagcctttaatgctttattaaaaactctt
gaggaacctcctgttcatgtaatttttatacttgctacaactgatccacaaaaaattcct
ttaactgttttgtcaagattgcaacgtcacaatttcaagaaaattactagcaagactatt
gctaaacaaattaaaaaagtttttgatttggaagcaattaaatatgaagatgaagcaatc
aattacatttcacgtcttgctcaaggtggaatgcgtgatgcactttctattagtgaacaa
gccattgcttatggaaatggaaaagtaactttggaagatattatcaactcttttggagtt
gtgtcaaatgaaactttaatagaaattattaataacttatctttgggcaaaattaaaaaa
gttttagaaacatttaataatttaaaaaatgatggaattgatccagaacaatttgtttat
agtctctttggcatccttgaagattacatagtgtttaaaaatacatacaatcatgaacta
ttagaatatttaaatttagaacaaattgaaaatttagaatgagaactagattattcaaca
aattgtttagatttaattttcaagttaatgaaagaattaaagtatagtgaaacgcctttt
caattaattgaaatttatttattaaaaatgatgaataaaaatgcaaatccaacaactact
ataaaagaaatgcaaacaactattaaagaaaataaaactaataatgaacttttaatagaa
ggaacaataaaagaaatgaaacataacgaaaatacagaaaataaagaaaaaaatacaaaa
gaaacaaatttaatttctgataatcttcaggaagaaaagaatgtttccactcaaaattta
aatgtaaatgacattttagaacaaagtcaagaatttgtcttagaatcacaagatcatcaa
gaagaccaaaatacaattgaaaatgatttactttcatttgaagaccagtatgttgatgat
ggactaatttcatctgctgaattttcaattgataataaagaatcaattgaaaacgatatg
ccaattccaacgctagcaaaatataaaaatactattgttttcgaagattatttaaataaa
gaaaagattgaacaaattttgagaaacagcactttaaatcttaataaaatggataaaact
atcagtgctcttaattttatggttagtgatagaaactacaaagatttaatagaagtttta
aataatttaaaattaatttctgctggagaaaaacatttacttttttatggtaattctaaa
actaatttagcttatttacaatacataaaagaaaatgcttacaattcaaatatacaaaac
tttattaaagattattttggcagttacaaacacttatatgttgttagcagaagacagaaa
gaattattatttgaattagattctaaatttgctcaagaaagcaaaaataatgttaaaact
aaagcagaagaattagaagatgttgttttagaaaaaacaaaaacaatgactgaaagtttg
tatgaaaaattattaaaattttag
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