KEGG   Mycoplasmopsis columbina: NCTC10178_00609
Entry
NCTC10178_00609   CDS       T06777                                 
Symbol
polC_2
Name
(GenBank) DNA polymerase III polC-type
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
mcom  Mycoplasmopsis columbina
Pathway
mcom03030  DNA replication
mcom03430  Mismatch repair
mcom03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mcom00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NCTC10178_00609 (polC_2)
   03430 Mismatch repair
    NCTC10178_00609 (polC_2)
   03440 Homologous recombination
    NCTC10178_00609 (polC_2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mcom03032]
    NCTC10178_00609 (polC_2)
   03400 DNA repair and recombination proteins [BR:mcom03400]
    NCTC10178_00609 (polC_2)
Enzymes [BR:mcom01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     NCTC10178_00609 (polC_2)
DNA replication proteins [BR:mcom03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     NCTC10178_00609 (polC_2)
DNA repair and recombination proteins [BR:mcom03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     NCTC10178_00609 (polC_2)
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T DNA_pol3_finger PHP HHH_6 DNA_pol_A_exo1 DUF1980_C DNA_pol3_a_NI T2SSK
Other DBs
NCBI-ProteinID: VEU77169
LinkDB
Position
1:725233..729612
AA seq 1459 aa
MTHHDNNFQNQKFLKFCSHFGIQIPKSMLNAQIINSVHVKEKDCIQLHIKFNEFINFHDI
KNFKLALNEKRHLGNIEVFYEFDLLQYTKEGLLNFCHNLTKTKFKYASLQNLNFDQNLIM
NSNYDFTLKIYNKNTYEQEKDIFYDFVAKLKGYGFQKLNFNLKLVEIKHETPIEIEVEKE
NLNFAIAQALKENQSIKKDEDSLFTRKKSFSRLNTSYANTTIENLYFLEDKTAVEISGLV
FKKEYKALNNANEKKHLYIISLTDLTSGIQLQYFTKELLSSEEEKILENDSWIKVKGRLA
LKIQESRETRIIYVDSFEKTVSPISESQDLMDEKDKRVELHISSKMNTMDGLLNPSEIIK
QAEKFKMPAVAIMDLNGCQGYPEFYNTAKKSSVKPLYGTAFTIINKNVNLIIGDFENVNL
RNTEYVAFDIETTSLFPRFGEVIEYGAVKVTQSLRIDNKEQFFIKAKQPLSSFTTNLTGI
TNKMLEDGKNIQDALDEIYSSLNNKIAIAHNARFDYHFLKEQFFKYNKPFPKFAVIDTLK
VSRFLFPDDSKHKLQDLAKKVDIIYDENQAHRGDYDAEVLANVWIQLIGILEKNNIFDLK
TLANQTSKSLYKREFAYEITTLAKNNQGLKEQFELISFASTDQYWNQPKLFWENLENKKN
ILIGSSTLRSKLLDDYFYGSTSLFIDTLEKLDYVEIPAPQVFSHWLEYGDLSKEELEFAL
KDIITKAKEKNKIVVATGDVKYNSILDKKAYEIVVYSKGIGNSRHYLYNYEKAKNNNIKI
PTQNFLTTKEMLEQFAFLNDDKLIREIVIDNTQKIANLCEDIKVIKEDLYTPNFDNSDLK
LKELVYKTAHEKYGEILPELIEKRIESELTPIIKHGFSVIYWISHVLIQKSIERGYVVGS
RGSVGSSITAYLSGVSEVNPLPAHYICLKCKKFELCQDKNITSGFDLDPKKCDNCGSLMD
TDGQTIPFETFLGFDADKVPDIDLNFSGEVQPEIHNEVKNIFGEYHTFRAGTVQTVADKT
AYGYVKNYAEETKQEINEIYVHYLAKRIEGVKRTTGQHPGGILIIPKEFDVTDFTATNFP
ANDVTSTWKTTHFDFKAIHDNLLKLDILGHDNPTIIKLLEEYTGIKTSAIPKKDPKVMSL
FSSTASMGIKPEDIDNEVTGALGLPEFGTKFVRKMLSSSKPSSFADLISLSGLSHGTDVW
VGNAEDLILKRNFKLSDVISCRDDILVKLMNVDVPRKDAFKIMEKVRKGKGLNSEEEEFL
LKYKVPQWQIDSMKKIKYMFPKAHAAAYVLMAWWSAYYKLYYPLEFYSVYLTARTDVLDI
ENMIDVKGGKRVARKLKELKIEEARRTISSTDEKLLPIFEIVQELYARGFYISNVSLTRS
KANEWVIDKENNCLIPPFTAVKQLGLAVANSIVSARDSKEFISIEDFKQRTTTNNTLLER
LKSMNVFDGLDTKNQMTLF
NT seq 4380 nt   +upstreamnt  +downstreamnt
atgacacatcatgataacaactttcaaaatcaaaaatttttaaaattttgttctcatttt
ggaattcaaattccaaaatcaatgttgaatgcacaaattataaattctgttcacgtaaaa
gaaaaagattgtattcaattgcatattaaatttaatgaatttattaactttcacgacata
aagaactttaaattagctttaaacgaaaaaagacatttggggaacattgaagttttttat
gaatttgacttattgcaatataccaaagaaggtttattgaatttttgccataatttgact
aaaaccaaatttaaatatgcatcacttcaaaatttaaattttgatcaaaatttaataatg
aattccaactatgatttcacactaaaaatctataacaaaaatacttatgaacaagaaaaa
gatatcttttacgattttgttgctaagttaaaagggtatggatttcaaaaattaaatttt
aatttgaaattagttgaaatcaagcatgaaacacctatagaaatagaagttgaaaaagaa
aatttaaactttgctattgcacaagctttaaaagaaaatcaaagtattaaaaaagatgaa
gacagtctttttactagaaaaaaatccttttcaagactaaacacttcttatgcaaataca
actattgaaaatttatattttttagaagacaaaactgcggttgaaattagcggattagtt
tttaaaaaagaatataaagccttaaataatgctaatgaaaaaaaacatctttatattatt
tctttaactgacttaacttctggtattcaacttcaatactttacaaaagaattattgtca
tcagaagaagaaaaaatattggaaaatgattcatgaattaaagtaaaaggtcgtttagct
cttaaaatacaagaatcaagagaaacaagaataatatatgttgattctttcgaaaaaact
gtttctcctatttctgaatctcaagatttaatggacgaaaaagataaaagagttgaactt
catatcagttctaaaatgaatacaatggatggtttattaaatccttctgaaattattaaa
caagcagaaaaattcaaaatgcctgctgttgcaattatggatttaaatggttgtcaaggt
tatcctgaattctacaatacagcaaaaaaaagtagtgttaaacctctttatggaaccgct
tttactattattaataaaaatgtgaatttaattattggtgattttgaaaatgttaattta
agaaatacagaatatgttgcattcgatatcgaaacaacttctctttttccaagatttggc
gaagttattgaatatggagcagtaaaagttacacaaagcttaagaattgataataaagaa
cagttctttattaaagctaaacaacctctttcttcatttacaaccaacttaaccggaata
accaataaaatgctagaagatggtaaaaatatacaagatgcattagatgaaatttattca
tctttaaacaataaaattgccattgctcataatgcacgtttcgactatcattttttaaaa
gaacaattttttaaatataataaaccttttccaaaatttgcagttatagacacattgaaa
gtatcacgttttctttttcctgatgattcaaaacacaaacttcaagatttagctaagaaa
gtagatattatttatgatgaaaatcaagctcaccgtggagattatgatgctgaagtttta
gcaaatgtttgaattcaattaattggtatcttagaaaaaaataatatttttgatttaaaa
actttggcaaatcaaacgtcaaaaagtttatataaacgcgaatttgcttatgaaataact
acattggcaaaaaataatcagggacttaaagagcaatttgaattgatttcttttgcttca
acagaccaatattgaaatcaaccaaaattattttgagaaaatttagaaaacaaaaaaaat
attttaattggttcaagtaccttaagaagtaagttattagatgattatttttatggctca
acttcgttatttatagatactttagaaaaacttgattatgtagaaatacctgcaccacaa
gtatttagtcactgattagaatatggtgatttaagcaaagaagaattagagtttgcacta
aaagatatcattacaaaagcaaaagaaaaaaacaaaattgttgtggctactggagatgtt
aaatacaattcaattttagacaaaaaagcctatgaaatagttgtatattcaaaaggtatt
ggaaatagtagacattatttgtataactatgaaaaagccaaaaacaataatattaaaatt
cctacacaaaatttcttgactactaaagaaatgttagaacaatttgcttttttaaatgat
gataaattgattagagaaattgttattgataatacacaaaaaattgctaatttatgtgaa
gatatcaaagttattaaggaagatttatacactccaaattttgacaattctgatttgaag
cttaaagaacttgtttacaaaactgctcatgaaaaatatggtgagattttgcctgaatta
attgaaaaaagaattgaatctgaacttactccgattattaaacatggtttttctgttatt
tattgaattagtcatgttttaattcaaaaatcaattgaaagaggctatgttgttggaagc
cgtggatctgtcggttcttcaattactgcatatctttctggggttagtgaagttaatcct
ttaccagcacattacatatgtttaaaatgtaaaaaatttgaactttgccaagacaaaaat
attacttctggattcgatttagatcctaagaaatgtgacaactgtggatctttaatggat
acagatgggcaaacaattccttttgaaactttcctaggttttgatgctgataaagtgccg
gatatagatttaaacttttcaggtgaagtgcaaccagaaattcataatgaagtaaaaaac
atttttggcgaataccacacatttagagccgggactgtacaaacagtggctgacaaaaca
gcgtatggatatgttaaaaattatgcagaagaaactaaacaagaaattaatgaaatttac
gtgcattatctagctaaaagaatagaaggagtaaaaagaactactggtcaacacccagga
ggaattttgattattcctaaagaattcgatgtaacagattttacagcaactaattttcca
gctaatgatgtaacttcaacttgaaaaactacacactttgattttaaagctattcatgat
aacttattaaaactagatattcttggtcatgataatccaactattattaaattattagaa
gaatatacaggaattaaaacatcagcaatccctaaaaaagatcctaaagtaatgtcttta
ttttcttcaactgcatcgatgggtattaaaccagaggatattgacaatgaagtaacaggc
gccttaggactaccagaatttggaaccaaattcgttagaaaaatgctctcttcatccaag
ccgtcatcttttgctgatttaatttcactttcaggtctttcacacggaacagatgtttga
gttggtaatgcagaagatttaattcttaaacgcaactttaaactaagcgacgttatttct
tgtcgtgatgatattttagtcaaattaatgaatgtagatgttccgcgtaaagacgcattt
aaaataatggaaaaagtgcgtaaaggtaaaggacttaattctgaggaggaagagttttta
cttaaatacaaagtgccgcaatgacaaattgatagtatgaaaaaaattaagtacatgttc
cctaaagcccatgctgctgcttatgtattaatggcttgatggtctgcgtattataaacta
tactatcctttagaattttattcagtttatttaactgctagaacagatgttttagacatt
gaaaacatgattgacgttaaaggtggtaaaagagttgccagaaaattaaaagaactaaaa
attgaagaagctcgtagaaccatttcttctactgatgaaaaattactaccaatttttgaa
atagtccaagaactttatgcaagaggattctatattagtaatgtttctctcactcgttct
aaagcaaatgaatgagtaatagacaaagaaaataattgtcttattcctccttttacagcc
gtaaaacaactaggacttgctgtggcaaattcaatagttagtgctagagattctaaagaa
tttatttccattgaggacttcaaacaaagaacaacaactaataacactttgcttgagaga
cttaaaagtatgaatgtttttgatggcttagatacaaaaaaccaaatgacactattttaa

DBGET integrated database retrieval system