KEGG   Mycoplasmopsis columbina: NCTC10178_00638
Entry
NCTC10178_00638   CDS       T06777                                 
Symbol
hsdR
Name
(GenBank) type I restriction system endonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
mcom  Mycoplasmopsis columbina
Brite
KEGG Orthology (KO) [BR:mcom00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:mcom02048]
    NCTC10178_00638 (hsdR)
Enzymes [BR:mcom01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     NCTC10178_00638 (hsdR)
Prokaryotic defense system [BR:mcom02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   NCTC10178_00638 (hsdR)
SSDB
Motif
Pfam: T1R_D3-like SWI2_SNF2 HSDR_N ResIII EcoR124_C DEAD
Other DBs
NCBI-ProteinID: VEU77197
LinkDB
Position
1:complement(762154..765261)
AA seq 1035 aa
MIKINPLSIGENGTIVELFEPIEKRSKEYQSEKDLEDYFIKDLEQLGYTHEKFKDEDALK
NNLRIQLEKLNNFSFTDNEWKTFYNDVIANEKDTIVEKTEKIQMHDRFVLNLDKPLNGIN
FKNIMLIDKENLNNNNIQVINQYVDNSEIKHRYDVTILVNGLPLVHIELKRRGASLKDAF
NQIERYQKKSFFNGSGLFNFIQIFVISNGTQTKYYSNTTRKLALDSRQKQVLNSGEKVTL
NSFEFTSYWADIKNNRISDLEDFTYYFFPKRIILNILTKYCVFTEEKNLLVMRPYQIAAT
EKILSRIKVALKNPILLGKHQGRSLGGGYIWHSTGSGKTLTSFKTAQLAKNIDELDKVMF
VVDRKDLDYQTIREYERFQKGCVTGSRNTNALRQALQSSDPKNKVIVTTIQKLSLLIESN
EDKKLGDKKIVFIFDECHRSQHGDWNRKIKNFFKKHIMFGFTGTPIFSTNSNSKDKILNL
TTELIFGDLLHTYTIADAIADGNVLKFNVQYNTLVKNFDQTVPFSQLTKDYYDDQKRIKT
IVSYVLDNFDRKTMRENGTFGFNSMFAAQSVKAVQLYYKEFKKQIKEKNLSLRIASIYSF
EPNDEDLINGSAFLEDIDQDFDIDRLNVSAKEFLAKIIKDYNEQFSTQFSIYGESFENYY
KDVSTRVKKREVDILLVCNMFLTGFDAPTLNTLWIDKQLDYHNLIQAYSRTNRIYNSSKP
CGNIVAFRDLEQSTINALKLFGNKDVENICLIRTFKEFFEDGYWVTNERLQTQEWNPSYK
TSIQELKEKYPLENFENNENTEEQEIDFIKKFGYILRLETILKSFDEFYLEENRIFQNRE
RQNYQSWYLDLKEKYRTYPDKKEKYNIEFEVEILKQNEYDAFAINKIVAEDLLKYKDYSK
TLREILMPYIKSNDGLRSKEDLLKGFAQLFQSKIVEGHKPDDINQLWKEYVMEWEEKELK
EIIKQNNYREEKAIAFMKDSFRRGYVKETGVELGAIVGGRITDSGPNGRIARREKAYELF
QKHFERFADAYRIKN
NT seq 3108 nt   +upstreamnt  +downstreamnt
atgattaagataaaccctttatctattggagaaaacggcacaattgttgaattatttgag
cctattgaaaaaagatctaaagaatatcaaagtgaaaaagatttagaagactatttcata
aaagatttagaacaattaggatacactcacgaaaaatttaaagatgaagatgcattgaaa
aataatttaagaattcaattagaaaaattgaataatttttcgtttaccgataatgagtga
aagactttttataatgatgttatagcaaatgaaaaagacacaattgttgaaaaaacagaa
aaaattcaaatgcacgatagatttgtattgaatttggacaaacctttaaatggcattaat
tttaaaaatataatgcttattgataaggaaaatttaaacaataataatattcaagttatt
aatcaatatgttgataattcagaaatcaagcatcgttatgatgttactattttggttaat
ggtttaccacttgttcatattgaattgaaaagaagaggtgcttctttaaaggatgcgttt
aatcaaattgaacgttatcaaaagaaatcattttttaatggctctggattatttaacttt
attcaaatttttgtaatttctaatggcacacaaaccaaatattattcaaacaccacaaga
aaattagcattagacagtagacaaaaacaagtgttaaattcgggtgaaaaagtaactttg
aattcttttgaatttactagttattgagcagatattaaaaacaatagaattagtgattta
gaagatttcacttattatttctttccaaagagaattattcttaacatcttaactaaatat
tgtgttttcactgaagaaaaaaaccttttagtcatgagaccatatcaaatagccgcgaca
gaaaaaattttgagcagaattaaagttgcactaaagaaccctatccttttaggaaaacat
caaggaagatctttaggagggggttacatctggcattccacaggatcaggaaaaacctta
acttcctttaaaacagcgcaattggcaaaaaatattgatgaacttgataaagtaatgttt
gtagttgatagaaaagatttagactatcaaacaattagagaatatgaacgttttcagaaa
gggtgcgtaacaggaagcagaaatacgaatgctcttagacaggctctacaaagcagtgat
ccaaaaaacaaggtaattgttacaacaattcaaaaactttctttattaattgagtcaaac
gaggataaaaaattaggtgataaaaaaattgttttcatctttgatgaatgtcaccgttca
caacacggtgattgaaatagaaaaattaaaaactttttcaaaaaacacattatgtttgga
tttactggaacacctattttctcaacaaacagtaatagtaaagacaagattttaaatctt
acaacagaattaatttttggtgatttactacatacttatacaattgccgatgccattgca
gatggaaatgttttaaaattcaatgttcaatataacactctagttaaaaattttgatcaa
acagtgccgttttcgcaattaacaaaagattattatgacgatcaaaaaagaattaaaaca
attgtttcttatgttttggacaattttgatcgtaaaactatgagagaaaacggaacattt
ggttttaattcaatgtttgcagctcaatctgtaaaagcggttcaactttactataaagaa
tttaaaaaacaaattaaagaaaaaaatttaagtctaagaatagcttcaatttatagtttt
gaacctaatgatgaagatttaattaacggtagtgcatttttagaggatattgatcaagat
tttgatatagatagattaaatgtatcagccaaagaatttttagcaaaaattattaaagat
tacaacgaacaattttctactcaattttcaatttatggtgaatcttttgaaaattactat
aaagacgtttcaacaagagtgaaaaaaagagaagttgatattttattagtatgtaacatg
ttcttaacaggttttgatgctccaactttaaatactttatgaatcgataaacaactagat
tatcataatttaatccaggcttattcaaggacaaacagaatttacaattcatctaaaccg
tgcggaaacatagtggcttttagagatttagaacaatcaacaataaatgctctaaagttg
tttggtaataaagatgtagaaaatatttgtttaataagaacatttaaagaattttttgaa
gatggatattgagtaacaaatgaaagacttcagactcaagaatgaaatccaagttataaa
acaagtattcaagaactaaaagaaaaatatcctcttgaaaattttgaaaacaatgagaat
actgaagaacaagaaattgattttattaaaaaatttggatacattttaagattagaaaca
attcttaaatcatttgatgaattttatttagaagaaaatcgtattttccaaaatagagaa
cgccaaaattatcaaagttgatatcttgatcttaaagaaaaatatagaacatatccagat
aaaaaagaaaaatacaatattgaatttgaagttgaaattttaaaacaaaatgagtacgat
gcctttgcaatcaataaaatagttgctgaagatcttcttaaatacaaagattattcaaaa
actttaagagaaattttgatgccatatattaaatctaatgatgggctaagaagtaaagaa
gacttattaaaaggattcgcacaattatttcaatcaaaaattgtagagggacataaacct
gatgatattaatcaactttgaaaagaatatgtaatggaatgagaagagaaagagttaaaa
gaaataattaaacaaaataactatagagaagaaaaagcaattgcttttatgaaagattct
ttcagaagaggatatgttaaagaaacaggagttgaattaggcgcaatagttggcggaaga
atcactgattctggaccaaatggaagaattgcaagaagagaaaaagcgtatgaattattt
caaaaacattttgaaagatttgctgatgcttatagaattaaaaactag

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