Mycobacterium cookii: MCOO_02470
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Entry
MCOO_02470 CDS
T07035
Symbol
rpoT
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
mcoo
Mycobacterium cookii
Brite
KEGG Orthology (KO) [BR:
mcoo00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MCOO_02470 (rpoT)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcoo03021
]
MCOO_02470 (rpoT)
Transcription machinery [BR:
mcoo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MCOO_02470 (rpoT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_20
Motif
Other DBs
NCBI-ProteinID:
BBX44232
UniProt:
A0A7I7KSB9
LinkDB
All DBs
Position
complement(258427..259914)
Genome browser
AA seq
495 aa
AA seq
DB search
MAATKARPATEEPVKRTAAKTPAGAAKRTPTKAANGAAPKTATKAAKAPAKAAAAPKART
ATKSAAAKSGPARGRPKKASADDAPHDAEVTTVDLETEDEVEDLDGEPDIDLEAEELALE
DLEDDSSDDEADPKEKAAVVTPAKAADEETAEDEEIVEPSEKDKASGDFVWDEDESEALR
QARKDAELTASADSVRAYLKQIGKVALLNAEEEVELAKRIEAGLYATQLMLELTDRGEKL
PAAQRRDMAWICRDGDRAKNHLLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVE
KFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLGRIQRELLQDLGRE
PTPEELAKEMDITPEKVLEIQQYAREPISLDQTIGDEGDSQLGDFIEDSEAVVAVDAVSF
TLLQDQLQSVLETLSEREAGVVRLRFGLTDGQPRTLDEIGQVYGVTRERIRQIESKTMSK
LRHPSRSQVLRDYLD
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcgaccaaagcacgaccggcaaccgaggagccggtgaagcgcaccgccgccaag
actcccgccggcgctgctaagcgcacaccgaccaaggccgccaacggcgccgcccccaag
acagccacgaaggccgcgaaagcccccgcgaaggcggccgccgcgcccaaggcgcggacc
gcgaccaagagcgccgctgccaagtcgggtcccgcacgcggccgacccaagaaagcgtcc
gccgacgacgctccgcacgacgccgaagtgacgactgtggacctcgagaccgaggatgag
gtcgaggacctcgacggcgaaccggatatcgatctcgaggctgaggaactggcactcgag
gatctcgaggacgactcatccgacgacgaggccgaccccaaggaaaaggcagcagtggta
acaccggccaaagccgccgacgaggagactgccgaagacgaggagatcgtcgagcccagc
gaaaaggacaaggcctcaggcgatttcgtctgggacgaggacgagtcggaggccttgcgg
caagcccgcaaagatgccgagctgaccgcgtccgcggactcggttcgcgcgtatctcaag
cagatcggcaaggtggcgctgctcaacgccgaggaggaagtcgagctggccaagcgcatc
gaggccggcctctacgccacccagctgatgctggagctgaccgaccgcggcgagaagctg
cccgcagcacagcgtcgcgacatggcgtggatctgccgcgacggcgaccgcgcgaaaaac
catctgctggaagccaacctgcgactggtggtatcgctggccaagcgttacaccggccgg
ggcatggcgttcctcgacctgatccaggaaggcaacctgggtctgatccgcgcggtcgaa
aagttcgactacaccaagggttacaagttctccacttacgcgacgtggtggatccgtcag
gcgatcacccgtgccatggccgaccaggcccgcaccatccgtatcccggtgcacatggtc
gaggtgatcaacaagctgggccgcatccagcgtgagctgctgcaggacctgggccgcgag
cccacgcccgaagagctggccaaagaaatggacatcactccggagaaggtgctggagatc
cagcaatacgcccgggagccgatctcgctggaccagaccatcggcgacgagggtgacagc
cagctcggagacttcatcgaggactccgaggccgtggtggccgtcgacgcggtgtcgttc
acgctgctgcaggatcagctccagtcggtgctggagacgctgtccgagcgtgaagccggc
gtggtacggctgcgtttcggcctcaccgacggacagccgcgcactctcgacgagatcggt
caggtgtacggcgtgacccgcgaacgcatccggcagatcgagtcgaagacgatgtcaaag
ttgcgccaccccagccgttctcaggtgctgcgcgactacctggactga
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