Mycobacterium cookii: MCOO_02700
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Entry
MCOO_02700 CDS
T07035
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mcoo
Mycobacterium cookii
Brite
KEGG Orthology (KO) [BR:
mcoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mcoo03016
]
MCOO_02700
Enzymes [BR:
mcoo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
MCOO_02700
Transfer RNA biogenesis [BR:
mcoo03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
MCOO_02700
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
BBX44255
UniProt:
A0A7I7KQ90
LinkDB
All DBs
Position
complement(279456..280739)
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AA seq
427 aa
AA seq
DB search
MTDPTTDTSDSAEPDVTPLLHPADGVPELSVSTSEIKAAAALLAGGHGPFAVDAERASGF
RYSNRAYLIQIRRAGAGSVLIDPVSHGGESMTVLAPVADVLSTDEWILHAADQDLPCLAE
VGMRPPALYDTELAGRLAGFDRVNLAAMVQRLLGLGLAKGHGAADWSKRPLPAAWLNYAA
LDVEALIDLREAIAAVLAEQGKTSWAAEEFDYLRTSVGVAPPSTRRDRWRRTSGIHKVRH
QRGLAAVRELWTVRDEIAQRRDIAPGRILPDSAIIEAATADPETLDDLVALPIFGGRRQR
RSASTWLAALQAARENPDSAEESEPPNGPPAPARWAKRRPEAAARLDAARAALREVSARV
SVPTENLVTPELVRRLCWDWEPTGDDAKAIDDFLTTGQARLWQRELVVPALATALRSTPD
DVSPDAR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgacagatccgaccaccgatacatccgacagcgccgaaccggacgtcacaccgctgctc
caccccgccgacggcgtgcccgagttgtccgtgtcgaccagcgagatcaaggcggcggcc
gcactgctggccggcggccacggcccgttcgccgtggacgccgaacgtgcttcgggtttt
cggtactccaatcgcgcgtacctgatccagattcggcgcgccggcgccggttccgtgctc
atcgacccggtcagccacggcggcgagtcgatgacggtgctggctcctgtcgccgacgtg
ctgtcgacggacgagtggattctgcacgccgccgatcaggacctgccgtgtctggccgag
gtcgggatgcgtccgcctgccctctacgacaccgagttggccggccgacttgccggcttc
gaccgggtcaacctcgccgcgatggtgcagcgactgctcggcttgggcttggccaagggt
catggcgccgccgactggtccaagcgtccgctgcccgcggcctggctcaactacgcagcg
ctcgacgtcgaagcgctcatcgacctgcgcgaggcgatcgcagctgtgctggcggagcag
ggtaaaacctcctgggccgcagaagaattcgactaccttcggacatccgtcggcgtggcg
ccgccgtcgacccgtcgcgaccgctggcgtcgcacgtccggcattcacaaagttcgccat
cagcgcggtctggcagccgtccgcgaattgtggaccgtgcgcgacgaaatcgcccaacgc
cgtgacatcgcaccggggcgcatcctgccggactcggcgatcatcgaggccgcgaccgcc
gacccggagaccctcgacgacctggtcgcgttgccgatcttcggcggccgcaggcagcgc
cgcagcgcctccacctggttggccgcgttacaggcagcgcgcgaaaatccggactccgca
gaggaatccgaaccgcctaacggtccaccggcgccggctcggtgggccaagcgcagaccc
gaggccgccgcgcgtctcgacgcggcacgggccgcactgcgcgaagtctcggcgcgggtc
tcagtgcccaccgagaatctggtgacgccggaactggtgcgacggctgtgctgggactgg
gagcccaccggcgacgatgcgaaggcgatcgacgatttcctgacgaccggacaggcccgg
ctgtggcaacgcgagctcgtggtcccggcgctggccaccgcgttgcggtcgacgccggac
gacgtcagtccagatgctcggtga
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