Mycobacterium cookii: MCOO_05710
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Entry
MCOO_05710 CDS
T07035
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mcoo
Mycobacterium cookii
Pathway
mcoo03030
DNA replication
mcoo03430
Mismatch repair
mcoo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MCOO_05710 (dnaE)
03430 Mismatch repair
MCOO_05710 (dnaE)
03440 Homologous recombination
MCOO_05710 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcoo03032
]
MCOO_05710 (dnaE)
03400 DNA repair and recombination proteins [BR:
mcoo03400
]
MCOO_05710 (dnaE)
Enzymes [BR:
mcoo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MCOO_05710 (dnaE)
DNA replication proteins [BR:
mcoo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MCOO_05710 (dnaE)
DNA repair and recombination proteins [BR:
mcoo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MCOO_05710 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
BBX44556
UniProt:
A0A7I7KS52
LinkDB
All DBs
Position
588429..591971
Genome browser
AA seq
1180 aa
AA seq
DB search
MSQSFVHLHNHTEYSMLDGAAKVAPMLAEAQRLEMPAIGMTDHGNMFGASEFYNGATAAG
IKPIIGIEAYIAPGSRFETRRVLWGDPGQKSDDVSGSGSYTHMTMVAENATGLRNLFKLS
SLASFEGQLGKWPRMDAELIAEHAAGIIATTGCPSGEVQTRLRLGHHREALEAAAKWREI
FGPENFFLELMDHGLSIERRVRDGLLEIGRTLNIPPLATNDCHYVTRDAAHNHEALLCVQ
TGKTLSDPNRFKFDGDGYFLKSAAEMRAIWDGDVPGACDSTLLIAERVTSYADVWAPCDR
MPVFPVPDGHDPSSWLRHEVDAGLRRRFGDAQPDGYAQRAAYEIEVICDKGFPSYFLIVA
DLINYARSVDIRVGPGRGSAAGSLVAYALGITDIDPIQHGLLFERFLNPERASMPDIDID
FDDRRRGEMVRYAADKWGHDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRITKAL
PPPIMAKDIPLSGITDPNHERFKEAAEVRSLIDTDPDVRTIYQTARGLEGLIRNAGVHAC
AVIMSSEPLTEVIPLWKRPQDGAIITGWDYPSCESIGLLKMDFLGLRNLTIIGDAIGNIK
ANRGIDLDLESLALDDPATFELLGRGETLGVFQLDGGPMRDLLRRMQPTGFEDIVAVLAL
YRPGPMGMNAHNDYADRKNNRQAIKPIHPELEEPLREILAETYGLIVYQEQIMRIAQKVA
GYSLARADILRKAMGKKKREVLEKEFEGFSEGMQANGFSAKAIKALWDTILPFADYAFNK
SHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPDVNE
SGLNFASVGADIRYGLGAVRNVGSNVVASLINTRTAKGKFTDFSDYLNKVDIAACNKKVT
ESLIKAGAFDSLKHPRKGLFLVHTDAVESVLGTKKAEAMGQFDLFGGDPNDGGVGADSVF
TIRVPDDEWDDKHKLALEREMLGLYVSGHPLNGIAHLLTSQVDTAIPAILDGDVANETMV
KVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSAVGGEIVDDAVVLVTAKV
AIRDDRIALIANDLVVPDFSNAQLNRPLAVSLPTRQCTIDKVSALKQVLARHPGTSQVHL
RLISGERTTTLELDASLRVTPSPALMGDLKALLGPGCLGG
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagtccttcgtgcacctgcacaaccacaccgaatactcgatgttggacggtgcg
gcgaaggtcgccccaatgctcgccgaagcacagcggctggagatgcccgcgatcgggatg
accgaccacggcaacatgttcggggccagcgagttctacaacggggccaccgcggcgggg
atcaagccgatcatcggtatcgaggcgtacatcgcgcccggttcacgcttcgagacccgc
cgcgttctgtggggtgacccggggcagaagagcgacgacgtgtccggcagcggctcctac
acgcacatgacgatggtcgccgagaacgccaccgggttgcgcaacctgttcaaactgtcg
tcgctggcgtccttcgaaggccagctgggcaagtggccgcggatggacgcggagctgatc
gccgagcacgccgccggcatcatcgccaccaccggctgcccgtccggggaggtgcagacc
cggctgcggctcggacatcaccgtgaggccctggaagccgccgccaagtggcgggagatc
ttcgggcccgagaatttcttcctggagttgatggaccacgggctgtccatcgagcgccgg
gtgcgcgacggcctgctggaaatcggtcgcacactgaacattccgccgctggccaccaac
gactgccactacgtcacccgcgatgccgcgcacaaccacgaggcgctgttgtgcgtgcag
accggcaagactctctcggaccccaaccggttcaagttcgacggcgacggctatttcctc
aagtcggccgccgagatgcgggcgatctgggacggtgacgtcccgggcgcctgcgactcc
accctgctgatcgccgagcgggtcacctcgtacgccgacgtgtgggcaccgtgcgaccgg
atgccggtcttcccggtgcccgacggacacgacccgtcgtcctggctgcgccacgaagtc
gacgcgggcctgcgacgccggttcggtgacgcgcagcctgacggctacgcacagcgggcc
gcctacgagatcgaagtcatctgcgacaagggttttccgtcgtactttctgatcgtcgcg
gacctgatcaactacgcgcgctcggtcgacatccgggtcggcccgggccgcggctcggcc
gccggctcgctggtggcctacgcgctgggcatcaccgacatcgatccgatccaacacggg
ttgctgttcgagcggttcctcaaccccgagcgcgcgtcgatgcccgatatcgatatcgac
ttcgacgaccgccggcgcggcgagatggtgcgctacgccgccgacaaatggggacacgac
cgcgtcgcccaggtcatcaccttcggcaccatcaaaaccaaagcggcgctgaaggattct
gcccgtatccactacgggcagcccggcttcgcgatcgccgaccgcatcaccaaggcattg
ccgccgccgatcatggccaaagacattccgctgtcgggtatcaccgatcccaaccacgag
cgcttcaaggaagccgccgaggtccgcagcctgatcgacaccgaccccgatgtgcggacc
atctaccagaccgcccgcggcctggaaggtctgatccgcaacgccggagtgcacgcctgc
gcggtgatcatgagcagcgagccgctgaccgaggtgatcccgctgtggaagcgcccgcag
gacggcgcgatcatcaccggctgggactacccgtcgtgtgagtcgatcgggctgctgaag
atggacttcctcggcctgcgcaacctgacgatcatcggcgacgcgatcggcaacatcaag
gccaaccgggggatcgacctcgacctggagtcgctcgcactcgacgatcccgccacgttc
gaattgctaggccgtggcgagactttgggagttttccagctggacggcgggccgatgcgc
gacctgctgcgacgcatgcagccgaccggattcgaagacatcgtcgccgtcctcgcgctg
taccggcccggcccgatgggcatgaacgcgcacaacgactacgctgaccgcaagaacaac
cggcaggcgatcaaaccgatccaccccgaactcgaggagcccctgcgcgagatcctcgcc
gagacctacggcctgatcgtgtatcaggagcagatcatgcgtatcgcgcagaaggtggcc
ggctactcgctggcccgagccgatatcttgcgcaaggcgatgggcaagaagaagcgtgag
gtgctcgagaaggagttcgagggcttctcagaaggcatgcaggccaacggattctcggcc
aaagccatcaaagcgctgtgggacaccatccttccgttcgccgactacgcgttcaacaaa
tcgcatgcggccggctacgggttggtctcgtattggacggcctacctcaaggccaactac
ccggccgaatacatggccgggctgctcacctcggtcggtgacgacaaggacaaggccgcg
gtctacctggccgactgccgcaagctcgggatcacggtgctgccgccggacgtcaacgag
tcggggctgaacttcgcctcggtcggcgccgacatccgctacggcctgggcgcggtgcgc
aatgtcggctcgaatgttgttgcctcgctgatcaacacccgcacggcgaaaggcaagttc
accgatttctccgattacctcaacaaggtcgacatcgcggcgtgcaacaagaaagtcact
gaatcgctgatcaaggcaggagctttcgactcgctcaagcatcctcgcaagggtctgttc
ctggtgcacaccgacgccgtcgagtcggtgctgggcaccaagaaggccgaggcgatgggt
cagttcgacctcttcggtggtgacccgaacgacgggggagtcggtgccgactcggtgttc
accatccgggttcccgacgacgagtgggacgacaagcacaaactcgcgttggagcgcgag
atgctgggcttgtatgtgtccggtcatccgctcaacgggatcgcgcacctgctgaccagc
caggtcgacaccgccatacccgcgatcctcgacggcgatgtcgccaacgagaccatggtc
aaggtgggcggcatcctggcgtcggtcaaccggcgggtcaacaaaaacggaatgccttgg
gcgtcggcgcaattggaagacctcaccggcggtatcgaagtgatgttcttcccgcacacc
tattccgctgtcggtggcgagatcgtcgacgacgcggtggtactggtcacggccaaggtg
gcgatccgcgacgaccggatcgctttgatcgccaacgaccttgtggtgcccgacttctcc
aacgcgcaactgaaccggccgctggcggtgagcctgccgacccggcaatgcacgatcgac
aaggtcagcgctctcaagcaggtgctggcgcgtcaccccggcacgtcgcaggttcacctg
cggctgatcagcggggagcggaccaccaccctcgagcttgacgcgtcgctgcgggtgacg
ccgtccccggcactgatgggcgacctgaaggcgctgctcggccccggctgtctgggcggc
tag
DBGET
integrated database retrieval system
