Mycobacterium cookii: MCOO_11980
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Entry
MCOO_11980 CDS
T07035
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mcoo
Mycobacterium cookii
Pathway
mcoo03030
DNA replication
mcoo03430
Mismatch repair
mcoo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MCOO_11980
03430 Mismatch repair
MCOO_11980
03440 Homologous recombination
MCOO_11980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcoo03032
]
MCOO_11980
03400 DNA repair and recombination proteins [BR:
mcoo03400
]
MCOO_11980
Enzymes [BR:
mcoo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MCOO_11980
DNA replication proteins [BR:
mcoo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MCOO_11980
DNA repair and recombination proteins [BR:
mcoo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MCOO_11980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
DEDDh_C
DNA_pol_A_exo1
NatB_MDM20
Motif
Other DBs
NCBI-ProteinID:
BBX45183
UniProt:
A0A7I7KTD9
LinkDB
All DBs
Position
1238184..1240103
Genome browser
AA seq
639 aa
AA seq
DB search
MSVSLPNVTAMGAPAAEQLSIPDIDGATEISLRETTFVVVDLETTGGRMTAADGKVADAI
TEIGAVKVRGGVVLGEFATLVDPQRSIPPQIIQLTGITTAMVCDAPTIASVLPMFLEFAR
GAVLVAHNARFDTGFLRAAADQCGIRWARPQVLCTVQLARRVLSREEAPSVRLAALARLF
AVASEPTHRALDDARATVEVLHALIERVGNQGVHTYADLRAYLPDVSPAQRRKRVLAQCL
PRRPGVYLFHGPADEVLYVGTAINLQRRVNQYFNGSDQRTRMKEMVTLATRVEHIECAHA
LEAGVRELRMLSAHAPPYNRRSKFPHRWWWVVLSDEAFPRFSVVRTPRHDRAVGPFRARA
DAVDTADLLARLTGVRTCTKRLARSALHGPACPLHEVSPCPGVRNATAAEYGPAPARAAA
LIDGLDNSALTDAARRIADLAGRQRYESAARLRDHAVAAVEVLWRGQRLRALAALPELIA
AAPDGDGGWQLAVVRHGQLAAAGTARRGVPPMPVVEAIGAGAQVILPQPAPLGGALVEET
ALIARWLTAPGVRIVRVTGADEATGWCTPLRSAGPWAQWAAAARSARVAAEQAVTSRDSD
LLTEPHPSREQLFGRAAVDGVGSPAQPVLPRRQPLGAAG
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgtcactgcctaacgtcaccgccatgggtgcgcccgctgccgagcagctgagc
atccccgacatcgacggggctaccgaaatctcgctgcgcgagaccactttcgtcgtcgtc
gacctcgagaccaccggcgggcgcatgaccgccgccgacggaaaagtcgccgacgcgatc
accgagatcggcgctgtcaaagtccgcggcggggtggtgctgggcgagttcgcgacgctg
gtcgacccgcaacgcagcatcccgccgcagatcatccagttgaccggcatcaccaccgcg
atggtgtgcgatgcgccgaccatcgcctcggtactgccgatgtttctcgaattcgcccgc
ggcgcggtgctggtcgcccacaacgcccggttcgatacgggcttcctgcgggccgctgcc
gatcagtgcgggatccgatgggcgaggccgcaggtgctgtgcacggtgcaactggcccgg
cgggtgctcagccgcgaggaagcgccgagtgtccgcctggcggcactggcgcgcctgttc
gcggtcgccagcgagcccacccaccgggccctggacgatgcgcgggccaccgtcgaggtg
ttgcatgcgctgatcgaacgcgtcggcaaccaaggtgtgcacacctacgccgacctgcgg
gcgtatctgcccgacgtctcgccggcgcagcgccgcaaacgagtgctggcgcagtgcctg
ccgcgccggcccggggtctacctgttccatggtccggccgacgaagtgctctatgtcggt
acagcaattaacttgcagcgcagggtaaaccaatatttcaacggctcggatcagcggacc
cggatgaaagagatggtcacgctggccaccagggtcgagcacatcgagtgcgcgcatgcg
ctggaagccggcgtccgggagctgcgcatgttgagcgcgcacgccccgccgtacaaccgc
cggtccaaattcccgcaccggtggtggtgggtggtattgagcgacgaggcttttccccga
ttctcggtggtacgcacccctcgccatgaccgcgcggtcggcccgttccgggcccgcgcc
gacgcggtcgacaccgcagacctgctggcgcgcctcaccggtgtgcggacctgcaccaag
cggctggcccgctcggcgctgcatggtccggcctgtccgctgcacgaggtctcgccgtgt
cccggggtacgcaatgcgacggcggccgaatacggcccggctcccgctcgtgccgcggcg
ctgatcgacggattggacaactccgcgctgaccgacgcggcgcggcggatcgccgacctg
gccgggcgacagcgctatgagagcgctgcgcggctgcgcgaccacgcggtggccgcggtc
gaggtgctgtggcgcgggcagcgcctgcgcgcgctggccgcgctgcccgagctgatcgct
gccgcgcccgacggcgacggcggctggcagctcgccgtcgtccgccacggccagctcgcc
gcggcgggcaccgcgcgacgcggtgtgccgccgatgcccgtcgtcgaggccatcggtgcc
ggggcgcaggtgatcctgccgcagcccgccccgctgggcggcgcgctggtggaggagacg
gccctgatcgcccgctggttaacggcccccggggtgcggatcgtgcgggtgaccggtgcc
gacgaggcgacgggctggtgcacgccgctgcggtccgcggggccgtgggcccagtgggcc
gcggcggcgcgttcggcgcgggtggccgccgaacaggccgtcaccagtcgcgactcagat
ctgctgaccgaaccgcacccatcgcgcgagcagctgttcggccgcgccgctgtcgatggc
gtcggcagcccggcgcagcccgtcctcccacgccggcagccactcggcgcggctggatag
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