KEGG   Mycobacterium cookii: MCOO_38480
Entry
MCOO_38480        CDS       T07035                                 
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
mcoo  Mycobacterium cookii
Pathway
mcoo03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mcoo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    MCOO_38480 (xthA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mcoo03400]
    MCOO_38480 (xthA)
Enzymes [BR:mcoo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     MCOO_38480 (xthA)
DNA repair and recombination proteins [BR:mcoo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     MCOO_38480 (xthA)
SSDB
Motif
Pfam: Exo_endo_phos Msg2_C DsbD_N
Other DBs
NCBI-ProteinID: BBX47833
UniProt: A0A7I7L135
LinkDB
Position
complement(4133281..4134093)
AA seq 270 aa
MGLRIATWNVNSIRSRLPRVLDWLERGEVDVLAMQETKCSDEQFPTMPFLELGYEVAHCG
FNQWNGVAIASRVGLDNIEIGFDGQPTWSSKPDVAAAAEARALAATCAGVRVWSLYVPNG
RTLDDPHYVYKLNWLAALRDAAEGWLRENPSAQIALVGDWNIAPTDDDVWSVEFFEGATH
VSEPERKAFDAIIDTQFADVVRPFTPGPGVYTYWDYTQLRFPKKQGMRIDFILASPALAG
RVSDAQIVREERKGKAPSDHAPVFVDLHTV
NT seq 813 nt   +upstreamnt  +downstreamnt
gtgggcctgcgaatagccacctggaacgtgaactcgatccgctcccggttgccccgcgtg
ctggattggctggaacgtggcgaggtcgacgtcctcgcaatgcaggagaccaaatgctcc
gacgagcagtttcccacgatgccgttcctcgaactcggctacgaggtggcgcattgcggc
ttcaaccagtggaacggcgtggcaatcgcgtcccgggtcggcctggacaacatcgagatc
ggcttcgacggccagcccacctggagcagcaaaccggacgtcgccgccgcagccgaagcc
cgcgcgctggccgcgacttgcgcaggagtgcgggtgtggagcctttacgtacccaacggc
cgcaccctggacgacccgcactatgtctacaaactgaattggcttgctgcactgcgtgat
gcagcagaaggctggctacgtgagaacccgtcggcgcagattgcgctcgtcggcgactgg
aatatcgcgccaaccgacgacgacgtctggagtgtcgaattcttcgagggtgcaacacac
gtctcggaacccgagcgcaaagcgttcgatgccatcattgacactcaattcgccgatgtg
gtacggcctttcacgcccgggcccggcgtctacacctattgggattacacccagctgaga
tttccgaagaaacaaggcatgcgcatcgacttcatcctcgcctcgcctgcgctcgcgggg
cgggtctccgacgcgcagatcgtgcgagaagaacgtaaaggcaaggcacccagcgatcac
gcaccggttttcgtggacctccacaccgtctga

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