Mycobacterium cookii: MCOO_42620
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Entry
MCOO_42620 CDS
T07035
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
mcoo
Mycobacterium cookii
Pathway
mcoo00521
Streptomycin biosynthesis
mcoo00523
Polyketide sugar unit biosynthesis
mcoo00541
Biosynthesis of various nucleotide sugars
mcoo01100
Metabolic pathways
mcoo01110
Biosynthesis of secondary metabolites
mcoo01250
Biosynthesis of nucleotide sugars
Module
mcoo_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
mcoo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
MCOO_42620 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
MCOO_42620 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
MCOO_42620 (rmlC)
Enzymes [BR:
mcoo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
MCOO_42620 (rmlC)
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Gene cluster
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Motif
Pfam:
dTDP_sugar_isom
FdtA
Motif
Other DBs
NCBI-ProteinID:
BBX48247
UniProt:
A0A7I7L2K0
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Position
complement(4549562..4550164)
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AA seq
200 aa
AA seq
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MKVRELDIAGAWEITPQTHGDSRGMFLEWLTDRAFTEFAGHHLDVRQANCSVSAAGVLRG
LHFAQLPPSQAKYVTCVSGSVFDVAVDIRLGSPTFGRWDAVTLDDRSRKTIYISEGLAHG
FLALQDNSTLMYLCSTEYNPQREHTIAATDPTLAIDWPSGHEICLSDRDAAAPTLDEVRA
AGLLPTWEETRAFVAGLKGD
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtccgtgaactcgacatcgccggcgcctgggagatcaccccgcagacgcacggc
gactcacggggaatgttcctcgaatggctgaccgaccgggcgttcaccgaattcgccggc
catcacctcgacgtccggcaggccaactgctcggtctcggcggccggcgtgctgcgcggc
ctgcacttcgcccagttgccgccgagccaggccaagtacgtgacctgcgtgtccggctcg
gtattcgatgtcgccgtcgacatccgtttgggctcaccgacattcggtcgctgggatgcg
gtcacgctcgacgaccgcagccgcaagacgatctacatctccgaaggacttgcgcacggt
ttccttgcactgcaagacaattcgacgctcatgtacctctgctcgaccgagtacaacccg
cagcgcgaacacaccatcgccgcgaccgatccgacgctggcgatcgactggccgagcggc
cacgaaatttgcctgtccgaccgcgacgccgccgcgcccacgctggatgaggtccgcgct
gccggcctgttgcccacttgggaggaaacccgggctttcgtcgcgggcctgaaaggcgat
tga
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