Mycobacterium cookii: MCOO_44280
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Entry
MCOO_44280 CDS
T07035
Symbol
sigF
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
mcoo
Mycobacterium cookii
Brite
KEGG Orthology (KO) [BR:
mcoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcoo03021
]
MCOO_44280 (sigF)
Transcription machinery [BR:
mcoo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MCOO_44280 (sigF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_3
HTH_24
Sigma70_ECF
HTH_Crp_2
MarR
HTH_IclR
MarR_2
DUF7343
KORA
HTH_31
Motif
Other DBs
NCBI-ProteinID:
BBX48413
UniProt:
A0A7I7L2R4
LinkDB
All DBs
Position
4730742..4731530
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AA seq
262 aa
AA seq
DB search
MTPRAVGSSSSRPNEYADVPDMFRELATLDADSSDFQRHRDKIVERCLPLADHIARRFEG
RGEPRDDLVQVARVGLVNAVARFDVETGSDFVSFAVPTVMGEVRRHFRDNSWSVKVPRRL
KELHLRLGAATADLSQRLGRAPTATELAAELDMDRTEVIEGLVAGSSYNTLSIDSGGSSG
DEEARAIADTLGDVDTGLERIENREALRPLLEGLPERERTVLVLRFFDSMTQTQIAERVG
ISQMHVSRLLAKSLARLRDELE
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
gtgacaccgcgagctgtcggcagttcgtcatctcgtcccaacgaatacgccgacgttccc
gacatgttccgtgagttggcgactctcgatgccgactcatcggacttccagcgtcatcgc
gacaagatcgtcgagcgctgcctgccgctggccgatcacatcgcgcgccgtttcgagggc
cgtggcgaaccacgcgacgacctggttcaggttgcgcgtgtcggcctggtcaacgccgtc
gcccggttcgacgtggagaccggctcggacttcgtctcgttcgcggtgcccaccgtcatg
ggcgaggttcgccggcattttcgggacaacagctggtcggtcaaggttccgcggcggctg
aaagagttgcacttgcgactcggcgcggcgaccgccgatctgtcgcagcggctgggtcgg
gcgccgaccgcgaccgagctcgccgcggaactcgacatggaccgcaccgaggtcatcgaa
ggcctggtggcaggcagctcctataacaccttgtccatcgacagcggcggcagcagcgga
gacgaggaagcgcgggctatcgccgacacgctcggcgacgtcgacaccggtctggaacgc
atcgagaaccgtgaggcgttgcgtcccctgctggaagggctgcccgagcgggagcgcacc
gtgctggtgctgcggttcttcgattcgatgacgcagacccagatcgccgagcgcgtcggc
atctcacaaatgcacgtctcgcgcctactcgcaaagtcgctggcgcgactacgggacgag
ctggaataa
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