Mycobacterium cookii: MCOO_45410
Help
Entry
MCOO_45410 CDS
T07035
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mcoo
Mycobacterium cookii
Pathway
mcoo03420
Nucleotide excision repair
mcoo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MCOO_45410
03430 Mismatch repair
MCOO_45410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcoo03400
]
MCOO_45410
Enzymes [BR:
mcoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MCOO_45410
DNA repair and recombination proteins [BR:
mcoo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MCOO_45410
MMR (mismatch excision repair)
Other MMR factors
MCOO_45410
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Collagen
Motif
Other DBs
NCBI-ProteinID:
BBX48526
UniProt:
A0A7I7L3J8
LinkDB
All DBs
Position
4843339..4846722
Genome browser
AA seq
1127 aa
AA seq
DB search
MTVIAPARYSPAELASALGLFEPTEEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLV
ANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGTELAVASPSVGEPTGTPLVSTYHA
FAGQLLGEYGLLSAGAGQPIEPDTRLLSETEMWQLAFDVVNGYPGELHTDKNPAAVTATV
LRLSSQLAEHLVDTGQLSDTHVGLEQLVHTLPAGRYQRDRGPSQWLLRMLATQAERAELV
PLIDALHRRMRAEKVMDFGTQMASAARLASAVPQVGEQLRSRYRVVLLDEYQDTGYAQRV
MLSALFGGGVDAELALTAVGDPIQSIYGWRGASATNLPRFTTDFPLPDGSPAPALELRTS
WRNPPTTLQVANAISADARRRSVAVRALRSRPDAAPGTVRCALLPDVQAERDWVADHLQQ
RYRQAGADGVAPPTAAVLVRRNADAASMAAALRARGVPVEVVGLAGLLSVPEVADVVAML
RLVADPTAGAAAMRVLTGPRWRLGARDVAALWRRAVAIASPAEPGAAGRRGQTARTGDTA
EPGAAGRRGHTARTGDTAEQIAQAAGPQADTAGLADALADPGPATGYSADGYRRIAALAE
EVDVLRSHLGHPLPDLVAEVRRLLGVDIEVRAALPAGGWAGAEQLDAFADVVSGYAERAT
AATESVASVGGLLAYLDAATVVENGLAPAQTVVAPNRVQVLTVHAAKGLEWQVVAVPHLS
GGLFPSTGQARTWLTDVAELPPLLRGDRSTQGVHGVPVLDTADVTDQKQLSDKISAHRSQ
LDQRRLDEERRLLYVAITRAEDTLLLSGHHWAATGIKPRGPSDFLLELKGIIDESAAAGE
HCGVVEQWAPEPAAGDPNPLRDRVHEAIWPIDPLGSRRADVERGAALVIAAMSGDESDEI
EDPENWAADVDALLDERTRALQPQAHPLPSGLSVSSLVDLARDPEHAAQRLTRRLPTRAE
PHALLGNAFHDWVERFYGTERLFDLADLPGAADADIAQRDAEKLAELQQAFLGSPWAART
PVAVEVPFEMAIGSRVVRGRIDAVFAEPDGGATVVDWKTGERPRGAEAERQAAIQLGVYR
LAWAALSGCDESLVRTAFHYVRSGATVTPDALPDPDDLAALLESGVA
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcatcgcaccggcgcgctacagcccggctgaattagcaagcgcgctcggactt
ttcgagcccaccgaagagcaggccgcggtgatcgccgccccgccgggtccgctggtcgtc
atcgccggtgcgggcgccgggaagaccgagacaatggccgcacgggtggtgtggctggtg
gccaacggctacgccgagccgggccaggtgttgggcctgacgttcacccgcaaggcagcc
ggccagctgttgcggcgggtcaggtcgcggctcgcccgcctcgccggaaccgaactggcc
gtcgcgagcccgtcggtcggcgagcccacgggcacaccgctggtcagcacctatcacgcc
ttcgccggacagctgctcggcgaatacggcctgctgtcggcgggcgcggggcagccgatc
gagccggacacccggctgctcagcgagaccgagatgtggcagctggccttcgacgtggtc
aacggctatccaggtgagctgcacaccgacaagaacccggccgccgtcaccgcgaccgtg
ctgcggctgtcgagccagctcgccgagcacctcgtcgacaccggtcaactcagcgacacc
catgtcgggctcgaacagctggtgcacaccttgccggcgggccgctaccagcgcgaccgc
ggccccagtcagtggctgctgcggatgctggccacccaggccgagcgtgccgagctggtg
ccgctgatcgacgccttgcaccgcaggatgcgggcggagaaggtgatggacttcggcacg
cagatggcgtccgcggcccggctggcctcggcggtcccgcaggtcggcgagcagttgcgc
agccgataccgggtggtgctgctcgatgagtaccaggacaccggatacgcccagcgcgtc
atgctctcggcactgttcggcggcggcgtagacgcggagttggcgctgaccgccgtcggc
gacccgatccagtccatctatggctggcgcggcgcgtcggcaaccaatcttccgcggttc
accaccgacttcccgctgcctgacggcagcccggcaccggcgctggaactgcgcaccagt
tggcgcaatccgccgaccaccttgcaggtggccaacgcgatctcggcggatgcgcgtcgc
cggtcggtggcggtgcgggcccttcgctcccggcccgacgccgcccccggcaccgtgcgc
tgcgcgctgctgcccgacgtgcaggccgagcgcgactgggtcgccgatcatctgcagcag
cgctaccggcaggccggcgctgacggtgtggcgccgccgactgccgcggttctggtgcgg
cgcaacgccgatgccgcgtcgatggccgcggctctgcgcgcccgaggggtgccggtcgag
gtggtcggacttgccggcctactgtcggtgcccgaggtcgccgacgtggtcgcgatgctg
cgcctggtcgccgacccgactgcgggagcggccgccatgcgggtgctcaccggcccccga
tggcggctcggtgcccgtgacgtcgcggcgctgtggcggcgcgcagtggcgatcgcaagc
ccggcggagccgggcgcagcgggtcgccgcggccaaaccgcccgcaccggtgacacggcg
gagccgggcgcagcgggtcgccgcggccacaccgcccgcaccggtgacacggcggagcag
atcgcccaggcggcggggccgcaggccgacaccgcgggcctggccgatgcactggccgat
cccggtccggccaccggctactcggccgacgggtaccggcgcatcgcggcgctcgccgaa
gaagtggatgtgctgcgcagccacctcggccacccgctgcccgatctggtggccgaggtg
cgtcggctactcggcgtcgacatcgaggtgcgcgcggcgctgcccgcgggcggatgggcg
ggagccgaacagctcgacgcattcgccgacgtggtcagcggctacgccgaacgggccact
gccgcaacggagtccgtggcctccgtcggcggtctgctggcctatctggacgccgcgacg
gtcgtcgaaaacggtttggcgccggcgcagaccgtcgtcgcgcccaaccgggtccaggtg
ctgaccgtgcatgccgcaaagggtctggaatggcaggtggtcgcggtgccgcacctgtcc
ggcggactgttcccgtcgaccggccaggctcgcacctggctcaccgacgtcgccgaactg
ccgccgttactgcgcggcgaccggtccactcagggcgtgcatggcgtgccggtgctcgac
accgccgacgtcaccgatcaaaaacagctctcggacaagatctctgcgcatcgcagccaa
ctggatcagcgtcgactcgacgaggagcgcaggttgctatacgtggcgatcacccgtgcc
gaagacaccctgctgctgtccggtcaccactgggcagccactggcatcaagccgcgcgga
ccgtcggattttcttcttgagctcaaaggcatcatcgatgagtcagcagccgccggcgaa
cactgcggcgtcgtcgagcagtgggcgcccgagccggcggccggcgatccaaacccgttg
cgcgaccgtgtgcatgaagcgatctggccgatcgacccgctcggcagtcgccgcgccgac
gtcgagcgcggcgccgcgctggtcatcgccgccatgtccggcgacgaatcggacgagatc
gaggatcccgaaaactgggccgccgacgtcgacgcgctgctcgacgagcggacacgcgcc
ctgcaaccgcaggcgcacccgctgcccagcgggctgtcggtcagcagcctggtcgacctc
gcccgcgaccccgagcacgccgcgcagcggttaacccgccgactgccaacccgcgcggag
ccgcatgcattgttgggcaatgcatttcacgactgggtcgagcgattctacggcaccgag
cgactgttcgacctcgccgacctgcccggcgccgcggacgccgacatcgcccagcgcgac
gccgagaagctggccgagttgcagcaggccttcctgggctccccgtgggccgcgcggaca
ccggtcgccgtcgaggtgccgttcgaaatggcgatcggcagccgggtggtgcgtggccgc
atcgacgcggtgttcgccgagcccgacggtggcgcaaccgtcgtggactggaagaccggc
gagcgaccgcgcggcgcggaagccgaacgtcaggccgccatccagctcggcgtctaccga
ctcgcctgggcagcgctcagtggctgcgatgaatcgttggtgcgcaccgcttttcactat
gtgcgcagcggggccaccgtcactcccgacgcgctgccggatcccgacgacctcgcggcg
ttgttagaaagcggcgtcgcttga
DBGET
integrated database retrieval system
