Macleaya cordata (plume poppy): BVC80_9091g21
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Entry
BVC80_9091g21 CDS
T12124
Name
(GenBank) Helicase
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
mcor
Macleaya cordata (plume poppy)
Pathway
mcor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BVC80_9091g21
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcor03041
]
BVC80_9091g21
Enzymes [BR:
mcor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BVC80_9091g21
Spliceosome [BR:
mcor03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
BVC80_9091g21
Complex B
BVC80_9091g21
Complex C
U2 SnRNP specific factors
BVC80_9091g21
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-ProteinID:
OVA02520
UniProt:
A0A200PWD9
LinkDB
All DBs
AA seq
811 aa
AA seq
DB search
MSSNNKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRSAPHDNYEDHDLDNIEYDDR
DSNPDVPKESNSGDDDGEVDPLDAFMEGIHEEMKAPVVPKAKEKAEKYRDDEEDDPVESF
LRAKKDVGLTLASEVLQAGYDSDEEVYAAAKAVDAGLIEYDSDDNPIVVDRKKIEPIPAL
DHSSIDYEPFNKDFYEEKDSIAGMSEQDVAEYRKSLAIRVSGFDVSRPVKTFEDCGFSTQ
LMGAIAKQGYEKPTPIQCQALPIVLSGRDIIGIAKTGSGKTASFVLPMIVHIMDQPELEK
EEGPIGVICAPTRELAHQIYLESKKFAKSNGIRVSAVYGGMSKLEQFKELKAGCEIVVAT
PGRLIDMLKMKALTMSRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPR
KVEKLAREILTDPVRVTVGEVGMANEDITQVVHVIPSDAEKMPWLLEKLPGMIDNGDVLV
FASKKATVDEIETQLVQRGFKVAALHGDKDQSSRMETLQKFKSGMYHVLIATDVAARGLD
IKSIKSVVNVDIARDMDMHVHRIGRTGRAGDKDGTAYTLITQKEARFAGELVNSLIAAGQ
NVSVELMDLAMKDGRFRSKRDARKGSGGKKGGGRGKGGSSSGRGVRGVDFGLGIGYSAES
TNPPSQFVPSRSAAVNVLKTGMMTQFKNSFVAATPDSTNQGSSNTSSTYVPKRPVLKGFV
SGGSIGGDINRAQTNSSFNPAPTSGGSTTSGNSRENGSQKNFEGSREKPRERRRPSGWDR
DTIDRFICDDLVNSKSQFSIMVDCRDWNCIL
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgaataataagaggaaattcggcttcgaaggcttcggtatcaaccgacaaaca
acctacaatttcgagcgttctcaagctcctcaaagactctacgttcctccatcatcacgt
tctgctcctcacgataactatgaagatcacgaccttgacaacatcgaatatgatgacaga
gatagcaatcccgatgtcccaaaagagtcgaacagtggcgatgatgatggagaagttgac
cctcttgatgcgttcatggagggaattcatgaagagatgaaagctccggtggttccgaag
gcgaaagagaaggcagagaagtatagggatgatgaagaggatgatccagttgagagcttt
ttgagggctaagaaagatgttggattgactttggcgtctgaggttcttcaggctgggtat
gattctgatgaggaagtttacgcagctgcgaaggctgttgatgccgggttgattgagtat
gattcagatgataatccaattgttgttgatagaaagaagattgaaccaattccggctttg
gatcacagttctattgattatgaaccattcaacaaggacttctatgaagaaaaagattcc
attgctggaatgagtgagcaggatgttgctgaataccggaaaagtttggctatacgtgtt
tcgggctttgatgttagcaggccagttaagacttttgaagattgtggattttctacacaa
ttgatgggtgctattgcgaaacaagggtacgagaagccaacaccaatacagtgccaggct
ttaccaattgtgctttctgggagagatattattggtattgcaaagactggttccggaaaa
actgcttcttttgttcttcccatgattgttcatattatggatcagcctgaacttgagaaa
gaagagggtcccataggagtgatatgtgcacctaccagagaattagcacatcaaatatat
ttggagtcgaagaaattcgcaaagtctaatggaattcgcgtctctgcagtttatggtgga
atgtctaaacttgagcaatttaaagaactaaaggccggttgtgagatagttgttgctact
cctgggagattgatagacatgctaaagatgaaggcactaactatgtccagagcaacttat
ctcgttcttgatgaagccgatcgaatgtttgacctaggcttcgagccacagataaggtct
attgttggtcagataagaccagaccgccagactttactcttttcggcaacaatgccccgc
aaagttgagaagttagctagggaaattctcactgatcctgtaagagttactgtgggtgaa
gtgggtatggctaatgaggatattactcaagttgttcatgtaattccttcagatgctgag
aagatgccttggcttctggagaagcttcctggaatgattgataatggagatgttctagtg
tttgcatcaaagaaagctacagtggatgagattgaaacccagctggttcaaaggggtttt
aaagttgcggctctccatggtgacaaagaccaatcttcgcgaatggaaactctgcagaag
tttaaatctggaatgtaccatgttctcattgcaactgatgttgctgctcgtggtcttgac
atcaagtcaattaagtcagttgtgaacgttgatattgcaagagatatggacatgcatgtt
catcgtattggtagaacgggtcgtgctggagataaggatggaacagcctacactcttatc
acacagaaggaggcacgctttgctggggaacttgtcaacagtttaattgctgctggtcag
aatgtctctgtggagctgatggatcttgctatgaaggacggaagattcagatccaaacgt
gatgcaagaaaaggatctggtgggaaaaaaggtggaggcaggggaaagggaggcagtagt
agtggaaggggtgtgcgtggtgtggattttggcctgggtattgggtatagtgcagaatca
acaaatccaccatctcagtttgttcctagtcggtcggctgctgttaatgtactgaagact
gggatgatgacacaattcaagaacagctttgtagctgcaacacctgattctacaaaccag
gggagcagtaacacttcaagcacatatgtccccaaaaggccagtgttaaaaggttttgtc
tctggtggttcaataggtggagacataaatagagcacaaacaaatagttcatttaatcct
gctcctacctcaggaggaagcaccactagtgggaactctagagagaatggcagtcagaag
aacttcgaaggttctagagaaaagccaagagagagacggaggccctctggttgggatcgg
gacactattgataggtttatttgtgatgatcttgtcaattctaaatctcagttctctatt
atggtggattgccgagattggaactgtatcctctga
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