Maribellus comscasis: GM418_05250
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Entry
GM418_05250 CDS
T07297
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mcos
Maribellus comscasis
Pathway
mcos03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mcos00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GM418_05250 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcos03021
]
GM418_05250 (rpoC)
03400 DNA repair and recombination proteins [BR:
mcos03400
]
GM418_05250 (rpoC)
Enzymes [BR:
mcos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GM418_05250 (rpoC)
Transcription machinery [BR:
mcos03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GM418_05250 (rpoC)
DNA repair and recombination proteins [BR:
mcos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GM418_05250 (rpoC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
PH_DUOX
ParM_N
Motif
Other DBs
NCBI-ProteinID:
QGY43086
UniProt:
A0A6I6JJT0
LinkDB
All DBs
Position
complement(1273583..1277842)
Genome browser
AA seq
1419 aa
AA seq
DB search
MAFRKDNKAKSSFSKVSISLSSPEEILERSFGEVLKPETINYRTYKPERDGLFCERIFGP
VKDYECHCGKYKRIRYKGIVCDRCGVEVTEKKVRRERMGHISLVVPVAHIWYFRSLPNKI
GYLLGLPTKKLDSIIYYERYVVINPGVKSVDGVKELDFLTEEEYLDILDTLPKDNQFLDD
DDPNKFIAKMGAEALYEILSRLDLDDLSYTLRHKANTETSQQRKNEALKRLQVVEAFRAS
KNLNRPEWMIVRVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLIEIKAP
EVILRNEKRMLQEAVDSLFDNSRKVNAVKTENNRALKSLSDSLKGKQGRFRQNLLGKRVD
YSARSVIVVGPKLQIHECGLPKDMAAELYKPFVIRKLIERGIVKTVKSAKKIVDRKDPVV
WEILENVLKGHPVMLNRAPTLHRLSIQAFQPVLIEGKAIQLHPLVCTGFNADFDGDQMAV
HLPLGNAAILEAQLLMLASHNLLNPANGAPIQVPSQDMVLGLYYMTKPRKGSRGEGMTFY
SAEEVLIAFYEKVIDLHAVIKLKVEDVDENGEYFKHIIETTVGRVLFNEYVPGEAGYINQ
LLTKKSLRTIISDVFKKSGNAVTVGFLDDIKNLGYNMAYRGGLSFNLDDVIIPEDKEGIV
GDGYAEVEEVISNYNMGFITNNERYNQVIDIWTHANSKLTHSVMKTLSTDKQGFNSIYMM
LDSGARGSKEQIRQLCGMRGLMAKPQKSGSTGSQIIENPILANFKEGLSVLEYFISTHGA
RKGLADTALKTADAGYLTRRLVDVAQDVIISEDDCGTLRGLVATAIKNNEEVVASLFDRI
IGRTSVHDIYHPLNGNLIVKSGDEITEEVASVIEESPIESVEIRSVLTCESKVGVCAKCY
GRNLATGKKVQKGEAVGVIAAQSIGEPGTQLTLRTFHVGGIAGNISAQSQVESKYDGYVE
IEELRSVERKDDEGKGIDIVVSRLAELKIIDKNTNIPLSTHPIPYGSKLYVKNGEEIRKG
KLICEWDPFNGVIITEFDGTIEFENLIDGITYREESDEQTGYSEKVIIETRDKTKNPTLK
IMDKKGEMIRSYNLPVGGHIAVSNNQEVKAGTVLVKIPRAAGKAGDITGGLPRVTELFEA
RNPSNPAVVSEVDGEVSLGKIKRGNREIIVTTKNNDVKKYLVPLSKQILVQENDYIRAGT
SLSDGATTPSDILAIKGPTAVQEYILNEVQDVYRMQGVKINDKHYEIIIRQMMRKVEIDD
PGDTRFLEKQVVDKNEFISENDWIYNKKVVIESGDAEGLRSGQIISARRLRDENSQLRRR
DKKLVEARDAIPATSSQILQGITKAALQTRSWLSAASFQETTKVLNEAAINGKTDYLDGL
KENVICGHLIPAGTGLKEYKNLVVGSKSEYDQLIDLKRS
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atggcattcagaaaagataacaaagcaaaaagtagtttttctaaagtttcaataagtctt
tcatctcctgaagaaattctggagaggtcgtttggcgaagtattgaaaccagagacaatt
aactacagaacatataaacctgagcgggatggtcttttttgcgagcggatttttgggccc
gtaaaagactacgaatgccattgcggtaaatacaaacgaatccgctataaaggaattgtt
tgcgaccgttgtggtgtggaagttacagagaaaaaagtgcgtcgtgaaagaatggggcac
atttcactggttgtgcctgttgcacatatttggtatttcagatcgttaccaaacaaaatt
ggttatttgttaggtcttccaaccaaaaaacttgattccattatttattatgaacgatat
gttgtaattaatcctggggttaaatcagttgatggggtgaaagagcttgacttcctgaca
gaagaggaatatcttgatattttggatacgcttccaaaagataaccagttccttgacgat
gatgatccaaacaaatttattgcaaaaatgggagctgaagctttgtatgaaatattaagc
aggctcgatttggatgatctttcttatacacttcgtcataaagcaaataccgaaacttcg
caacagcgtaaaaacgaagcattgaaacgtctgcaggttgttgaagcattcagggcaagt
aaaaacctgaaccgtccggaatggatgattgttcgcgttgttcctgtaattcctcccgac
ctgcgccctttggttccgcttgatggtggtcgttttgcaacatctgatttgaatgacctt
taccgaagagtaatcattcgaaacaaccgtttgaaacgattgatcgaaatcaaggcaccc
gaggtaatcttaagaaatgaaaaacgaatgctgcaggaagctgtggattcgctatttgat
aattcaaggaaagtaaatgccgtaaaaacagaaaataaccgcgcattaaaatcactttcc
gatagtttaaaagggaaacaaggtcgtttccgtcaaaaccttttgggaaaacgtgtcgac
tattccgcacgttctgtaattgtggtaggtcccaaattacaaatccatgaatgtggtctt
ccaaaagatatggcagccgaattatacaaaccttttgtaattcgtaaactgattgaaaga
gggattgtaaaaacggtaaaatcggccaaaaagattgttgaccgaaaagatccggttgta
tgggaaatcctcgaaaatgtattaaaggggcacccggtgatgttaaaccgtgcgcccaca
ttgcaccgattgtcaattcaggctttccaacctgtattaatagagggcaaagcaatccag
cttcacccgctggtttgtacaggatttaacgccgacttcgacggcgaccagatggctgtt
cacttaccgctgggaaatgcggcaattctggaagcgcaattattgatgcttgcttcgcat
aaccttttgaaccccgccaacggtgctccgattcaggttccgtcgcaggatatggttctt
ggcttatattatatgaccaagccacgtaaaggttcaagaggagaaggaatgacattttat
tcagcagaagaagtattaattgctttttacgaaaaagtgattgatcttcatgcagtaatt
aaacttaaagttgaagacgtagacgaaaacggcgaatatttcaaacatattattgaaact
actgtcggtcgcgttcttttcaatgagtacgttccaggagaagctggttatataaatcag
ttactgactaaaaagtcgcttcgtacaattatctcagatgtatttaagaaatccggaaat
gcggtaactgttggattcctcgacgatatcaaaaatcttggatacaacatggcttatcgc
ggtggattgtcgtttaaccttgatgatgttatcattcctgaagataaggaaggaattgtt
ggcgatggttatgcagaagtagaagaggttatcagcaattataacatgggattcattacc
aataatgaaagatataatcaggttattgatatttggacgcatgcaaactcaaagcttact
cactcagtaatgaagacgttgagcacagataaacaaggctttaactctatttatatgatg
cttgactctggtgcccgtggatcgaaagaacagattcgtcagctttgcggaatgagggga
ttgatggcaaaaccacagaaatcaggatcaaccggttcgcagattattgagaacccgatt
ttggccaactttaaagaaggtctttcggtgttggagtactttatttcaactcacggtgcg
cgtaaaggtttggctgataccgcactaaaaactgctgatgctggttatcttacccgtcgt
ttggttgatgttgctcaggatgttatcatttccgaagatgactgcggaacattacgtggt
ttggtcgctactgcaattaaaaataacgaggaagttgttgcatcgcttttcgaccgaatt
attggccgcacatcagttcatgatatctatcacccgttgaacgggaatctgattgttaag
tcaggtgacgaaattaccgaagaagttgcaagtgtaattgaagaatctccgattgagagt
gttgaaatccgttcggttttaacttgtgaatcaaaagtaggggtttgtgctaaatgttac
ggcagaaacctggctacgggcaaaaaagttcaaaaaggtgaagctgttggggtaattgct
gcacagtcgattggtgaaccaggaacacagcttacattacgaacattccacgtgggtggt
atcgcaggtaacatttcagctcaatcacaggttgaatcaaaatacgatggttatgttgaa
attgaagaacttcgttcggttgagcgcaaagacgatgaaggaaaaggaatcgatattgtt
gtaagtcgtttggctgaattaaaaattattgataaaaatacaaatattcctttgtctact
caccccatcccatatggttcaaaattgtatgtgaaaaatggtgaagaaataagaaaagga
aaattaatatgcgaatgggacccgtttaatggtgtaattattactgaatttgacggaacc
attgagtttgaaaaccttattgatggtattacttatcgcgaagaatcagatgaacaaacc
ggttacagcgagaaagtaattatcgaaaccagggataaaaccaaaaacccgaccctgaaa
atcatggataaaaaaggcgagatgatccgttcatacaaccttccggttggtggtcatatt
gccgtatccaataatcaggaagttaaagcaggtactgttttggttaaaattccccgcgct
gccggtaaagcaggcgatatcactggtggtttgccacgtgttaccgagttattcgaggct
cgtaatccttcaaatcctgcagttgtttcggaggttgatggtgaggtttctctgggtaaa
atcaaaagaggtaaccgcgaaattatcgttaccaccaaaaataacgacgttaaaaaatac
ttggtaccactttcaaaacagattttggttcaggagaacgattatattcgggcaggaaca
tcgctttccgacggagctacaactccttctgatattttggctattaaaggtccgacagca
gttcaggaatacattttgaatgaagtgcaggacgtttaccgtatgcagggtgtgaaaatt
aatgataaacattatgaaatcattattcgccaaatgatgcgaaaagttgaaatcgatgac
ccgggtgatacacgcttccttgaaaaacaagttgttgataaaaatgagtttatctctgaa
aacgactggatttataacaaaaaagttgttatcgagtccggtgatgctgaaggtttgagg
tcaggtcagattatctcggccagaagattaagagatgaaaattcccagttgagaagaaga
gataaaaagctggttgaagcgagggacgcaattcccgcaacatcaagccagattcttcag
gggattactaaagcggcgttgcaaacacgcagttggttatcagcagcttccttccaggaa
acaacaaaagttctcaatgaagcagcgataaacggtaaaaccgattatctcgacggattg
aaagaaaacgtaatttgtggtcacctgattcctgctggtacagggttgaaagaatataag
aaccttgtagtagggtcaaaatcagaatatgaccaattgatcgacttgaaaagatcctaa
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