Maribellus comscasis: GM418_12085
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Entry
GM418_12085 CDS
T07297
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mcos
Maribellus comscasis
Pathway
mcos03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GM418_12085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcos03019
]
GM418_12085
03009 Ribosome biogenesis [BR:
mcos03009
]
GM418_12085
Enzymes [BR:
mcos01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GM418_12085
Messenger RNA biogenesis [BR:
mcos03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GM418_12085
Ribosome biogenesis [BR:
mcos03009
]
Prokaryotic type
rRNA helicases
GM418_12085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
SNF2-rel_dom
NAT10_TcmA_helicase
DUF5420
CMS1
Motif
Other DBs
NCBI-ProteinID:
QGY44368
UniProt:
A0A6I6JTG6
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All DBs
Position
3057212..3058894
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AA seq
560 aa
AA seq
DB search
MTLFNEMGLSSEIQLAIEELGFEQPTPVQEKTIPFLLEEKQDMVALAQTGTGKTAAFGLP
IIQQIDTTKKDSQALILSPTRELALQIANDINTFSKHLPKINVAVLYGGADIKKQIKDLE
RGAQIIVGTPGRTLDLIKRKKLKVNDIQWLVLDEADEMLSMGFKDDLDAILENSPEGKQT
LLFSATMPKEIVGIANKYMSNPFEISVGKKNTGAENVEHNYYVVHAKDRYLALKRVADVN
PNIYGIIFCRTRMETKEVADKLMQDGYNADALHGDLSQAQRDHVMARFRGKHLQMLVATD
VAARGLDVNDLTHVINYNLPDDPEVYIHRSGRTGRAGKKGISVTLIHLREKGKLRQVEKI
VNKKFVKKEVPSGKEICEKQLFSLIDKVERIEVNESQIGEFMPVIYKKLAWLDREELIKR
FVSVEFNRFLDYYKNAPDINVDESKQNDDYPEGRRSRKRDRKKRGDRNDRSDRNDRRRGG
YEFSRFFFNLGKKNGISKRTIIDLVNQNLPNKSVEIGNIEVLKSFSFFEVDKRFEREVLK
SFKNAKYKGQRIGIDIAKGK
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgacattatttaatgaaatggggctaagctccgaaattcagttggcaattgaagaactt
ggttttgagcagcccacaccagttcaggaaaagacaattccatttttactggaagaaaag
caggatatggttgccctggcgcaaaccggaacagggaaaactgccgcttttggtttgcca
attattcagcagattgatacaacaaaaaaagattctcaggctttgatattaagcccgacc
cgggaattggcacttcaaattgccaatgacatcaatacattttcaaaacatcttcccaaa
attaatgtagccgttctttatggtggcgccgatataaaaaaacaaattaaagatttggaa
cgtggcgcacagattattgtcggaacacccggaagaacactcgatttaatcaaacgtaaa
aagctgaaagtaaacgatattcagtggcttgtgttagatgaggctgacgagatgctttcc
atgggttttaaagacgatttggatgcaattttggaaaattcgccggaaggaaaacaaact
ttgctgttttcggccacaatgcctaaagaaattgtaggtattgccaacaaatacatgagc
aatccatttgaaatctcagttgggaagaaaaataccggtgctgaaaatgtggaacacaat
tattatgtggttcatgcaaaagacagatatctggcgttaaagcgtgttgccgacgtcaat
ccgaatatttacggaatcatattttgtcgtacccgaatggaaaccaaagaagttgccgat
aaattgatgcaggatggatacaatgccgacgcactgcatggtgatttatcgcaggcacag
cgcgatcatgtaatggctcgtttccggggaaaacatctacaaatgttggtggctaccgat
gtggcagcgcgtgggttggatgtgaacgacctgacacacgttataaattataatttgccg
gatgatccggaagtttatattcatcgtagtggcagaacaggacgtgcagggaaaaaaggt
atttctgttactttgattcacctgcgtgaaaaaggtaaattacgccaggttgaaaaaatt
gtaaataaaaagtttgttaaaaaagaggttccctccggaaaggaaatttgtgaaaaacag
ctttttagtcttatcgacaaggtggagaggattgaagtaaacgaatcacagattggcgaa
tttatgccggtaatctacaaaaaactggcctggctcgatcgtgaagaactgatcaaacgt
tttgtttcggttgaatttaatcggtttctcgattattataaaaatgcacccgatattaat
gtggatgaatccaaacaaaacgatgattacccggaagggcggcggagcagaaaacgcgac
cgtaaaaaaagaggtgaccgaaatgatcgaagcgacaggaatgacaggagaagaggtggt
tatgagttttcccgattcttttttaatttggggaaaaagaacggtatcagtaaacggacc
attatcgatttagtgaaccagaatttgcctaataagagcgttgagattggaaatatagag
gtactgaaaagtttttcgttttttgaagttgataaacgtttcgaaagagaagttttgaaa
tcatttaaaaatgctaaatacaaaggtcagcgcatcggaattgatattgcaaaagggaaa
tag
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