Mycoplasmopsis columboralis: NCTC10179_00167
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Entry
NCTC10179_00167 CDS
T06766
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
mcou
Mycoplasmopsis columboralis
Brite
KEGG Orthology (KO) [BR:
mcou00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NCTC10179_00167 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcou03021
]
NCTC10179_00167 (rpoD)
Transcription machinery [BR:
mcou03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NCTC10179_00167 (rpoD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r1_2
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
VEU76010
UniProt:
A0A449B5Y2
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All DBs
Position
1:complement(209671..211209)
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AA seq
512 aa
AA seq
DB search
MEKYKSVLSALEKELKSKKKKSFDQEEVFDFLLKKKIVIDDESSDEFFDLLREKDLIRDQ
VDFGDEDFATLNDIKLEIKKDTKANKSKKSTKKETKKSKKTQNPEELDELEIEADFGVLD
DIEIDLDFEKEPLDDEDFDDFDDELDSEDIDVEFEDEVEENDTAEDEESEESDEDSNFES
ESFDDEEYDLNDLSLTDFVSDIDLNEEDPTKKRKSLQNKLTETNDIVKWYMRWIGKYGEL
LTVEEEKRLATLMEKGGFRGKKARDKLIQSNLRLVINNAKKYKNRGLSFIDLISEGNAGI
LKAVQKYNVHKGFKFSTYATWWIRQAITRAVADQARTIRVPVHMVETINKISKIERELQQ
ELGTEPTDEQIAERFGQGYTPDKVRYIRKINIDPISLDKQVGKENDSSFSDFVKDENVVN
PVDFAAQEELAEVLEEIIDETLEPEEKDLLCKRYGVGKNEKGERYRIHSLEELAKERGNV
SKERIRQIENKILRKLKSNSKHGKNLKDFLKN
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaatataaatcagtattaagtgcattagaaaaagaattaaaatctaagaaaaag
aaaagcttcgatcaagaagaagtttttgattttttattaaaaaagaagatcgtaattgat
gatgaaagttccgatgaatttttcgatttattaagagaaaaagatttaattagagatcaa
gttgattttggagacgaagatttcgctacattaaatgatataaaacttgaaattaaaaaa
gatactaaagcaaacaaatcaaaaaaatcaaccaaaaaagaaactaaaaaaagtaaaaaa
acccaaaatccagaagaacttgatgaattggaaattgaagcagatttcggagttttagac
gatattgaaattgacttggatttcgaaaaagaacctctggatgatgaagattttgatgat
tttgatgatgaattagattctgaagatattgatgtagaatttgaagatgaagttgaagaa
aatgataccgctgaagatgaggaatctgaagaatctgatgaagattccaactttgaaagc
gaaagttttgatgatgaggaatatgatttaaacgacttgagtttaactgattttgttagt
gatattgatctaaatgaagaagatccaactaagaaacgtaaatctttacaaaataaatta
actgaaactaacgacattgttaaatgatacatgcgttgaattggaaaatacggtgagtta
cttactgtcgaagaagaaaaacgtttagcaacattaatggaaaaaggtggatttagaggt
aaaaaagctagagataaacttatccaaagtaatttacgtttagttattaataatgcaaaa
aaatacaaaaatcgtggactttcatttattgatttaatttcagaaggaaatgctggaatt
ttaaaagctgttcaaaaatataatgttcacaaaggattcaaattttcaacatatgcgact
tgatgaattcgtcaagcaattactcgtgcagtagctgatcaagctagaactattcgtgtc
cctgtacatatggtagaaacaatcaataaaatttctaaaatcgaaagggaattacaacag
gaattaggtaccgaaccaactgatgaacaaattgccgaaagatttggacaaggttatact
ccagacaaagttcgttatattagaaaaatcaatatcgatccaatttcacttgataagcaa
gtaggaaaagaaaatgattcaagtttcagtgattttgttaaagatgaaaatgttgtaaac
ccagttgattttgctgctcaagaagaattagcggaagttcttgaagaaattattgatgaa
acacttgaaccagaagaaaaagatcttctttgcaaaagatatggtgttggtaaaaatgaa
aaaggtgaaagatatcgaatccactctttagaagaattggccaaagaaagagggaacgtt
tcaaaagaaagaattagacaaattgaaaataaaattcttagaaaattaaaatctaattca
aaacacggcaaaaacttaaaggattttcttaaaaactaa
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