Mycoplasmopsis columboralis: NCTC10179_00294
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Entry
NCTC10179_00294 CDS
T06766
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mcou
Mycoplasmopsis columboralis
Pathway
mcou03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mcou00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC10179_00294 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcou03021
]
NCTC10179_00294 (rpoC)
03400 DNA repair and recombination proteins [BR:
mcou03400
]
NCTC10179_00294 (rpoC)
Enzymes [BR:
mcou01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCTC10179_00294 (rpoC)
Transcription machinery [BR:
mcou03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCTC10179_00294 (rpoC)
DNA repair and recombination proteins [BR:
mcou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCTC10179_00294 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
VEU76127
UniProt:
A0A449B695
LinkDB
All DBs
Position
1:complement(373443..377837)
Genome browser
AA seq
1464 aa
AA seq
DB search
MSNFTDKKTDNLLNKITLSLATNEDVLNWSHGEVTKPETINYKSYKPEKDGLFDELIFGP
TTDYKCPVCSTKYKKSDENTICTKTPACEKYQPRILPKITRRTRMGHIKLHNPVVHFWFF
KIDHSIIAKLLGLRVADSNTPVSKSDLENLIYYKSHIVLESGSLKSLKKNTIININEAAN
IYEEALMEMLENYPKDSEEYEDIYNALTELREYASSKMGKDYGIDFYEYNDIIHEFSDAK
IGTGSQAIEYLLKNIDLEREAELVQAKIDEINASENISSTNLQDRSKLYKRLTIINSFIK
SGQKPTNMLIYNLPVIPADLRPLVQLDGGRHSTSDVNELYRRIIIRNNRLAKWNESDAPM
LIKQNEYRMIQEAVDALIDNARKKPSPVSSKDGHPLKSISDALTGKKGRFRQNLLGKRVD
YSGRSVIVVGPTLKMYEVGIPRDMAAKLFEPWIIKEIINSEESVKNVKAAKKLVESLNPS
IWPYVERAIEGRPVLLNRAPTLHRLSIQGFQPVLIRGKAIKLHPLVTTAFNADFDGDQMA
VHVPISEQAVREVKELMLASKNILGPRDGEPIINPSQDMILGLYYLTLEKAQAKGEGNFY
ATFNDMLNAYENGYITLHTRVVLPIEAVDKLSVLNSTNRPYITSTVGKFILNRAFPSDFE
FVFGKRVTVISSNVNGEVKVKESESIHTSENALDEYTFEYGTNFREAIATLPVNNALVKK
DIAKIIRRVYEKYVAVVTIEDIAGILDSLKESNYKNKFEECASLKDYKNEEISTSHASLI
NKFIQEEFENIKFKYFRKSENIDDELNLSHYTELLENVWFRYSNYVASILDNIKDLGFKY
STISGTTISMNDITTLPTTKDKIKEGEEYVEQLKNYFAHGYLTDDERYNLTIQKWSQVKE
SIEKDLKEVTKSDLDNPLFMMFTSGARGNASNFTQLAGMRGLMNNNAKVLKADAENDRVV
RSTVEIPVKSSFLDGLTAYEFYSSTHGARKGLTDTALNTAKSGYLTRRLVDVAQGIVVRE
EDCGSDFGFVVKDIKDTKTDTVIESLIERIEGRFTNRPIFDNNGEMIVDSNSLITPELAN
KIVNEYGKTEVEIRSVLSCHTRNGVCKRCYGKDLATNRIVNIGEAVGVVAAQSIGEPGTQ
LTMRTFHTGGVAGVADITGGFGRLIELIDAYDLPWGRPAVISKVYGKVKSIKPAKDSQGK
DSDTLLVEVETKNQQGMPEPVHHAVKVSQKLRVKVGDLVTPGQKLVEGPIIINDLLEKAD
TRAVQNYLLKEVQRLYRLQGIAIADKYIEIIIRQMLSKIIITDPGDSDFFTGSLVDRFIY
QRENGRLIAQGKRPAFGEVKIKGAKQTPLLSDSFLAAASYQETAKILVNSSISNRVDYLQ
GLKENIILGYKIPAGTNSNYDPKSKYDIRDPKSYFTNKSAAQEIPTERIVYDIDNLFDNV
SLDEVELYEDHSMNDSFDDEYDNE
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atgagtaattttacagacaaaaaaactgataatttactaaacaaaatcactctttcactg
gctacaaatgaagatgtgttaaattgatcacacggtgaggttaccaaacctgaaacaatt
aactataaatcatataaaccagaaaaagacggactttttgatgaattaatttttggtcca
accactgattataaatgtccggtgtgttcaaccaaatacaaaaaaagtgatgaaaacaca
atttgtacaaaaactccagcttgtgaaaaatatcaaccaagaattcttccaaaaattact
agaagaactagaatgggacatattaaacttcacaatccagttgtacacttctgatttttc
aaaattgaccactcaattattgctaaacttttaggacttagagttgcagattcaaacact
ccagtttcaaaatcagatttagaaaaccttatctactacaaatctcacattgttttggaa
agtggtagtttaaaatcacttaagaaaaataccattattaacattaacgaagctgcaaac
atttatgaagaagcgttaatggaaatgcttgaaaattacccaaaagattctgaagaatat
gaagatatttataatgctttaaccgaacttagagaatatgcatcttcaaaaatgggaaaa
gattatggaattgatttttacgaatacaatgacataattcacgaattttcagatgcaaaa
atcggaactgggtctcaagcaattgaatacttacttaaaaatattgatcttgagcgtgaa
gctgaacttgttcaagctaaaatcgacgaaattaatgcttcagaaaacatctcttcaacc
aacttgcaagatcgttcaaaactttacaaaagacttactattattaattcatttattaaa
tcaggtcaaaaaccaaccaacatgttgatttacaatcttccagttattccagcggactta
cgtccacttgtacaactagatggtggaagacattcaaccagtgatgttaacgaactttac
cgtcgtatcatcattagaaataaccgtttagctaaatgaaatgaatctgatgctcctatg
cttattaagcaaaatgagtatcgtatgattcaagaagctgtcgatgctttaattgataac
gccagaaaaaaaccatctccggtatcatcaaaagatgggcacccacttaaatccatttct
gatgctttaaccgggaaaaaaggtcgtttccgtcaaaaccttttagggaaacgtgttgat
tactcaggacgtagcgttattgttgttggacctactttaaaaatgtatgaggtagggatt
cctagagacatggctgctaaattgtttgaaccatgaattattaaagaaattattaattct
gaagaaagtgttaaaaacgttaaagcagctaaaaaattagttgaatcattaaacccttca
atttgaccatatgttgaaagagcaatcgaagggcgtcctgtacttttaaaccgtgctcct
acattgcaccgtctttcaattcaagggttccaaccagttttaattagaggtaaagctatt
aaattacaccctcttgtaacaactgcgtttaacgccgattttgacggggaccaaatggct
gtgcacgttccaatttcagaacaagcagtaagagaagttaaagaattgatgttggcttct
aaaaacattcttggacctcgtgatggtgaacctatcatcaacccttctcaagatatgatt
ttaggtctttactaccttacattagaaaaagcgcaagctaagggtgaaggtaatttctat
gcaacatttaatgatatgcttaatgcttatgaaaatggatacatcactcttcacacaaga
gtagtgcttccaattgaagctgtagataaattatctgtactcaattcaactaatcgtcca
tacattacttcaactgttggtaaatttattttaaatagagctttcccaagtgattttgaa
tttgtttttggtaaaagagtaactgtaatatcaagcaatgttaatggcgaagtaaaagtt
aaagaatcagaatcaattcacacttcagaaaatgctttagacgaatatacatttgaatat
ggaacaaactttagagaagcaattgctactcttccagttaataatgcattagttaaaaaa
gatattgctaaaattattcgtcgtgtatatgaaaaatatgttgctgttgttacaattgaa
gacatcgctggaattttagattctcttaaagaaagtaattacaaaaataaatttgaagaa
tgtgcttcattaaaagattataaaaatgaagaaatttcaacttcacacgcatcattaatt
aataaatttattcaggaagaatttgaaaacattaaattcaaatactttagaaaatcagaa
aacattgatgatgaattaaatctttcacactacactgaattacttgaaaatgtatgattt
agatattcaaattatgttgcttctattttagataacatcaaagatttaggatttaaatat
tcaacaatttcaggaacaaccatctcaatgaatgacattactactttaccaactacaaag
gataaaattaaagagggtgaagagtatgttgaacaacttaaaaactactttgctcatggt
tatttaactgacgatgaacgttataacttaactattcaaaaatgatcacaagttaaagaa
tcaattgaaaaagatcttaaagaagtaactaaatcagatttagataacccattatttatg
atgtttacttcaggggctcgtggaaacgcatctaactttactcagcttgctggtatgcgt
ggattgatgaataacaacgccaaagttcttaaagccgatgctgaaaacgaccgtgttgtt
cgttcaactgttgaaattccagttaaatcatcattccttgatgggcttactgcttatgag
ttctattcttcaactcacggggctcgtaagggacttaccgatactgcgcttaacaccgca
aaatcaggatatttaactcgtagattagttgatgtggctcaaggaattgttgttcgtgaa
gaagattgtggtagtgactttggttttgtagttaaagatatcaaagatactaaaaccgat
acagttattgaatcattaattgaaagaattgaaggtagatttactaaccgtccaattttt
gataacaacggagaaatgattgttgattctaattctttaattactccagaattagcaaat
aaaattgttaatgaatacggtaaaactgaagttgaaattcgttcagtgttatcttgtcac
acacgtaatggagtatgtaagcgttgctacggtaaagatttagcaaccaacagaatcgtt
aatattggtgaagctgttggagttgttgctgctcaatcaatcggggaacctggaacacaa
cttaccatgcgtaccttccacaccggaggggtagctggggtagccgatattactggtgga
tttggtcgtttaattgagcttattgatgcttacgatcttccatgaggtagacctgcggtt
atttcaaaagtttatggaaaggttaaatcaattaaaccagccaaagattctcaaggaaaa
gattcagatactttacttgtagaagtggaaactaaaaaccaacaaggaatgcctgaacca
gtgcatcatgccgttaaagtttctcaaaaactaagagttaaagttggtgatttggtaaca
ccaggacaaaaacttgttgaaggtcctattattattaacgaccttcttgaaaaagctgat
actagagctgtccaaaattatttacttaaagaagttcaaagattgtatcgtcttcaaggg
attgcaattgcagataaatacattgaaatcattattcgtcaaatgctttcaaaaattatt
attaccgatccaggagattcagatttcttcaccggaagtttagttgatagatttatctat
caaagagaaaatggacgtttaattgctcaaggtaaacgtccagcatttggagaagtaaaa
atcaaaggagcaaaacaaactcctcttcttagtgattcgttcttagctgctgcatcatac
caagagacagctaaaattctagttaactcatcaatttcaaatcgtgttgattatcttcaa
ggacttaaagaaaatatcattttaggatacaaaattcctgctggaacaaattcaaattac
gatccaaaaagcaaatacgatattcgtgatcctaaatcatatttcaccaataaatctgct
gctcaagaaattccaacagaaagaattgtctacgatattgacaacttatttgacaatgtt
agtttagacgaagttgagctttatgaagaccattcaatgaatgattcatttgatgatgaa
tatgacaatgaataa
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