Mycoplasma capricolum subsp. capricolum ATCC 27343: MCAP_0255
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Entry
MCAP_0255 CDS
T00309
Name
(GenBank) conserved hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mcp
Mycoplasma capricolum subsp. capricolum ATCC 27343
Pathway
mcp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MCAP_0255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcp03019
]
MCAP_0255
Messenger RNA biogenesis [BR:
mcp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MCAP_0255
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RNase_J_b_CASP
NADH-UOR_E
RNase_HII
RMMBL
DUF8031
Motif
Other DBs
NCBI-ProteinID:
ABC01088
UniProt:
Q2SSM2
LinkDB
All DBs
Position
complement(310275..312026)
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AA seq
583 aa
AA seq
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MPDIKFTALGGQDERGKNLYVLEIDNDFFILDAGVKYPEKDILGIDTVIPKFDYIKQNKK
KIKGIFLTNPSAYNMGAIPYLLKEIEAPIYCNEITELIARIKFQKLRVKNKDHILKVVHD
KDILKIGNTKVEIFRTTSSSPQSFGYVFHTELGSIVYAGDYIIDGKEQSYFSTDYTHLSQ
IAKRGVLALISDAEFASRKDFTVPNHKIDKYILAPFKEKNTKIIVAIFEEDIHKLGQICM
AAKENNRKIAVYGRTMDAVLRSNLIHENLVIKPEDLISIQEYVNSNNGVLIISGTGDDLY
SKLAKIATSNDSLVEFTEKDLIILTNTPVAGVEKRHAQILDELARTDARLLALSDKNIWS
MRASYEDIKMLTSILNPKYFIPIKALYKDFLNAEKAAIEAGVNNQNIGIIDNGEILKLSK
NHLAISEHGAEHGNVYVDGSGIGDVGSIVLNERKQLATDGVIIVGATIDSRNKELISLID
TQMRGVLYIQEDNPIFKILQREITNLIIEGQALYKKDPKKYDLNEIKKDITSRIKQLIKQ
ESGKTPIVLVIINESDGKGYIPKNNKKRFNNPGKNNKSKRDKS
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgccagatattaaatttactgctcttggtggtcaagatgagagaggaaaaaatctttat
gttttagaaatagataatgatttttttatacttgatgccggggttaagtaccctgaaaaa
gacattttaggaattgatacagtgattcctaaatttgactatattaaacaaaacaaaaaa
aagataaaaggaatttttttaacaaatcctagtgcttataatatgggagctattccttat
ttattaaaagaaattgaagcaccaatttattgcaatgaaattactgaattaattgcaaga
attaaatttcaaaagttaagagtaaaaaataaggatcatatattaaaagttgttcatgat
aaagatattttaaaaataggaaataccaaagttgagatttttagaacaacttcatcttca
ccacaatcatttggatatgtctttcataccgaattaggttctattgtttatgctggtgat
tatattattgatggaaaagaacaatcttatttttcaactgactatactcatttatctcaa
attgcaaaaaggggtgttctagctttaattagtgatgctgagtttgcttcaagaaaagat
tttactgttccaaaccataaaatagataaatacatattagctccatttaaagaaaaaaac
actaaaattattgttgcaatttttgaagaagatattcataaattaggccaaatatgtatg
gccgctaaagaaaacaatagaaaaatagcagtttatggaagaacaatggatgcagtttta
agatctaatttaatccatgaaaatctagttataaaacctgaagatttaatttcaatccaa
gaatatgttaattcaaataatggagttttaataatctcaggtactggtgatgatctttat
tcaaaattagcaaaaattgctacttctaatgatagtttagttgagtttacagaaaaagat
ctaattattttaacaaataccccagttgctggagttgaaaaacgccatgctcaaattctt
gatgaacttgcaagaactgatgctagattacttgcattaagtgataaaaatatttgatct
atgagagcaagttatgaagacattaaaatgctaacttctattttaaatccaaaatacttt
attccaataaaagctttatataaagattttttaaatgccgaaaaggcggctattgaagct
ggtgttaataatcaaaatattggaattattgataatggtgaaattttaaaattatcaaag
aatcatttagcaatatcagaacatggtgctgaacacggaaatgtttatgttgatggatct
ggaattggagatgttggttctattgttttaaatgaaagaaaacaattggcaactgatgga
gtaattatagttggagccactattgatagtagaaataaagagttaatttctttaattgac
acacaaatgagaggtgttttatatattcaagaagataaccctatctttaaaattttgcaa
agagaaattactaacttaattattgaaggacaagctttatataaaaaagatcctaaaaaa
tatgatttaaacgaaattaaaaaagatataacatctagaattaaacaattaataaaacaa
gaatcaggaaaaacaccaattgttttagtaattattaatgaatctgatggtaaaggttat
attcctaaaaataataaaaaaagatttaacaacccaggcaaaaacaataaatctaaaaga
gataaatcctaa
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