Mycobacterium canettii CIPT 140060008: BN44_20187
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Entry
BN44_20187 CDS
T02419
Symbol
polA
Name
(GenBank) Putative DNA polymerase I PolA
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mcq
Mycobacterium canettii CIPT 140060008
Pathway
mcq03030
DNA replication
mcq03410
Base excision repair
mcq03420
Nucleotide excision repair
mcq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BN44_20187 (polA)
03410 Base excision repair
BN44_20187 (polA)
03420 Nucleotide excision repair
BN44_20187 (polA)
03440 Homologous recombination
BN44_20187 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcq03032
]
BN44_20187 (polA)
03400 DNA repair and recombination proteins [BR:
mcq03400
]
BN44_20187 (polA)
Enzymes [BR:
mcq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BN44_20187 (polA)
DNA replication proteins [BR:
mcq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BN44_20187 (polA)
DNA repair and recombination proteins [BR:
mcq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BN44_20187 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BN44_20187 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
NYN_YacP
HHH_2
Motif
Other DBs
NCBI-ProteinID:
CCK51559
LinkDB
All DBs
Position
1831427..1834141
Genome browser
AA seq
904 aa
AA seq
DB search
MVTTASAPSEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLL
RDEAPTHIAAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEP
GFEADDLIATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVV
EKYGLTPRQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVG
DALRANLASVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFD
TLAAAGGPEVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAV
AAADGEGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDT
ALAAYLVRPGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDDTDAETIQTTILRARA
VIDLADALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRD
AAEAAYGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFL
QHLLAHRDVTRLKVTVDGLLQAVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAG
RRIRDAFVVGGGFAELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFAVP
IEEVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAV
VERARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDK
ALNEAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYPLDVPLEVSVGYGRSWD
AAAH
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
gtggtgactactgccagtgcccccagcgaggatcgagccaagccgacgctgatgttgctg
gatggcaattcgctggcgtttcgggcgttctacgcactgcccgcggagaacttcaagacc
cgcggcgggctgaccaccaacgccgtctacggcttcaccgccatgctgatcaacctgctg
cgcgatgaagccccgacgcacatcgcggcggctttcgacgtgtcccggcagaccttccgc
ttgcaacgctacccggagtacaaggccaaccgatcgtcgacccccgacgagttcgctggc
cagatcgacatcaccaaagaagtgctgggcgcactcggcatcaccgtgctctccgagccg
gggttcgaggccgacgacctcatcgccacgctggccacccaggccgagaacgagggctac
cgggtgctggtggtcaccggggatcgtgacgcactgcaactggtcagtgacgatgtgacg
gtgctctacccccgcaagggcgtcagcgaacttacgcgcttcacaccggaggccgtcgtc
gaaaagtacgggctcacccctaggcagtacccggacttcgccgcgctgcgcggcgacccc
agcgataacctgcccggcatacccggggtgggggagaagaccgccgccaaatggatcgcc
gagtacggctcgctgcggtcactggtggacaacgttgacgccgtgcgcggcaaggtgggc
gatgcgctgcgggcgaacctggccagcgtggtgcgcaaccgtgagctcaccgacctggtt
cgcgacgtgccgctggcccagaccccggacacgctgcggctgcagccctgggatcgcgac
cacattcaccggctcttcgacgacctggagtttcgggtgttgcgcgaccggttgttcgac
acgttggccgcggccgggggacccgaggtcgacgaggggttcgacgtgcgcggcggcgcg
ttggcgcccggcacggttaggcaatggttggccgagcacgccggcgacgggcgccgagcg
ggcctgacggtggtgggtacccatctgccgcacggtggggacgctaccgctatggccgtc
gccgccgccgacggcgaaggcgcttacctcgataccgcgacgctgacgcccgacgacgac
gccgcgttggcggcctggctagcggatccagctaaacccaaagccttgcatgaggcaaag
gcggccgttcatgacctggcgggtcgtggttggaccttggagggcgtcacctccgacacc
gcactggcggcctacctggtgcggccggggcagcgcagcttcaccctcgacgacctctcg
ctgcgctatctgcgtcgcgagctgcgtgcggaaacaccgcagcagcaacaactttcactg
ctcgatgacgacgatacggacgccgagaccattcaaacgacgatcctgcgggcgcgggca
gtcatcgacctggccgacgcgctggacgccgagttagcgcgtatcgactccaccgcgctg
ctgggggagatggagctgccggtccagcgggtgctggcgaagatggaaagtgccggtatc
gccgtcgacctgcccatgttgaccgagctgcaaagccagtttggcgaccagatccgcgac
gccgccgaggccgcctacggcgtgatcggcaagcaaatcaacctgggctcacccaagcag
ctgcaggtcgtgctgttcgacgaactgggcatgccgaagaccaaacgcaccaagaccggc
tacaccacggatgccgacgcgctgcagtcgttgttcgacaagaccgggcatccgtttctg
caacatctgctcgcccaccgcgacgtcacccggctcaaggtcaccgtcgacgggttgctc
caagcggtggccgccgacggtcgcatccacaccacgttcaaccagacgatcgccgcgacc
ggccggctctcctcgaccgaacccaacctgcagaacatcccgatccgtaccgacgccgga
cggcgcatccgggacgccttcgtggtcgggggcggattcgccgagttgatgacggccgac
tacagccagatcgagatgcggatcatggcgcacctgtccggggacgagggcctcatcgag
gcgttcaacaccggggaggacctgcattcgtttgtcgcgtcccgggcgttcgccgtgccg
atcgaggaggttaccggcgagctgcggcgccgggtcaaggcgatgtcctacgggctggct
tacgggttgagcgcctacggcctgtcgcagcagttgaaaatctccaccgaggaagccaac
gagcagatggacgcgtatttcgcccgattcggcggggtgcgcgactacctgcgcgccgta
gtcgagcgggcccgcaaggacggctacacctcgacggtgctgggccgtcgccgctacctg
cccgagctggacagcagcaaccgtcaagtgcgggaggccgccgagcgggcggcgctgaac
gcgccgatccagggcagcgcggccgacatcatcaaggtggccatgatccaggtcgacaag
gcgctcaacgaggcacagctggcgtcgcgcatgctgctgcaggtccacgacgagctgctg
ttcgaaatcgcccccggtgaacgcgagcgggtcgaggccctggtgcgcgacaagatgggc
ggcgcttacccgctcgacgtcccgctggaggtgtcggtgggctacggccgcagctgggac
gcggcggcgcactga
DBGET
integrated database retrieval system
