Mycoplasmopsis californica ST-6: MCFN_00225
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Entry
MCFN_00225 CDS
T03247
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
mcr
Mycoplasmopsis californica ST-6
Brite
KEGG Orthology (KO) [BR:
mcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mcr03016
]
MCFN_00225 (gidA)
03036 Chromosome and associated proteins [BR:
mcr03036
]
MCFN_00225 (gidA)
Transfer RNA biogenesis [BR:
mcr03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
MCFN_00225 (gidA)
Prokaryotic type
MCFN_00225 (gidA)
Chromosome and associated proteins [BR:
mcr03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
MCFN_00225 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C
GIDA_C_1st
Pyr_redox_2
FAD_oxidored
FAD_binding_2
HI0933_like
Thi4
Pyr_redox_3
NAD_binding_8
DUF520
DAO
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
AIA29224
UniProt:
A0A059XL38
LinkDB
All DBs
Position
complement(46832..48664)
Genome browser
AA seq
610 aa
AA seq
DB search
MNNKYYDAIVVGGGHAGLEAAFALAHQKHKTLLISFNKNKLGMMPCNPSIGGPAKGIITR
EIDALGGMQGLWADMATIQLKMLNQSKGPAVWALRAQIDKEKYSKIAAEFVEKEEYLDLL
EAGVEELIVEDNTYKGVVIDTGEKLYSKVVVITTGTYMASKILRGSEAISSGPDNEKTTS
TLSNSLKKHGFNLQRLKTGTPPRIWSNSIDYNEVQQEVLEDINLSFSSRSSVITPKQIAC
HLTYTTPQTHELINKNLHKSAMYSGLIEGIGPRYCPSIEDKIVKFASKERHQIFFEPETA
DGTITYVNGLSTSLPIDVQKELIKTIPGLKNAKVQKWAYAIEYDAIDPLQLHPSLETKII
KNLFTAGQINGTSGYEEAAGQGLIAGINAGLKIIAKEPIVILRNHGYLGVLIDDLVTKGT
KEPYRMLTSRAEYRLLLRNDNADIRLAEYGLYAGTISQKQYDEVIEKYKLIDDEIERLHS
TYLSGKSEIAHKYKIYDGVTMLKVLSRPDVDPDDIIPDFKYKRELTIMVRLHGYIEKQKT
DASKMVRLENLKIPVNIDYENIKNIATEARQKLSKIRPQTIGQASRISGINPADIQMLMF
HIESNKNEKN
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgaataataaatattatgatgcaatcgttgtggggggtggacatgcgggtttagaagcc
gcattcgctttagcacatcaaaaacacaaaacactgttaatttcattcaataaaaacaaa
ttgggtatgatgccttgcaatccgtcaattggtggtccggcaaaaggtattattactcgg
gaaatagatgcactcggcggaatgcaaggactttgagctgatatggcaaccattcaactg
aaaatgctaaatcaatcaaaaggtcctgcagtttgagcgctaagggctcaaattgataag
gaaaaatactctaaaattgcagcagaatttgtagaaaaagaagaatatctagatttatta
gaagcaggggttgaggaattaattgttgaagacaacacttataaaggcgttgtgattgac
actggtgaaaaattatattcaaaagttgttgtaataacaactggaacatacatggcctca
aaaattcttcgtggtagcgaagcgatttcaagtggtccagacaatgaaaaaacaacttca
acactgtcaaattccttaaaaaaacacggttttaaccttcaaagattaaaaaccggaact
cctccgcgtatttgatcaaattcaatagattataatgaagttcaacaagaagtcttagaa
gatattaatttaagtttttcatcccgctcaagtgttatcacacctaaacaaatcgcctgt
cacttaacatacaccactccccaaacacacgaattaattaataaaaacttgcataaaagt
gcaatgtattcaggtttgattgaaggaattgggccaagatactgtccttcaatagaagat
aaaatagttaaattcgcttccaaagaaagacatcaaatatttttcgaaccagaaacagcc
gatggcacaataacctatgttaatggattatcaacttctttgccaattgatgttcaaaaa
gaactaatcaaaactattcctggactcaaaaatgcaaaagttcaaaaatgagcttatgct
attgaatacgatgcaatagatcctttacaattacacccgtcattggaaactaaaattatt
aaaaatttatttactgctggacaaataaatggaaccagcggctacgaagaggccgctggc
cagggtttaatcgctggtattaatgcaggtttaaaaattatcgctaaagagccaatagtt
attctgagaaatcacggatatttgggcgttttgattgatgatttagtcacaaaaggcact
aaagaaccttatcgcatgctaacttcacgagctgaatatagacttcttcttcgtaatgat
aatgcagatatacgacttgctgaatacggcttgtatgcaggtacaatttcacaaaaacaa
tacgatgaggtaattgaaaaatacaaattaattgacgatgaaattgaacgtttacactca
acatatctttctggcaagtcagaaatagctcacaaatacaaaatttatgatggcgtaaca
atgctaaaagttttatctcgccccgatgtcgatccagatgacattattcctgacttcaaa
tataaacgcgaactaaccataatggttagattgcatggctatatcgaaaaacaaaaaaca
gatgcaagcaaaatggtgcgtctagaaaatctaaaaattcctgttaatattgactacgaa
aacataaaaaatattgcaaccgaagcaagacaaaaactctctaaaatccgccctcaaact
attgggcaagcaagtagaatcagcggcattaaccctgctgatattcaaatgctaatgttt
catattgaaagtaacaaaaatgaaaaaaattag
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