Mycoplasmopsis californica ST-6: MCFN_00330
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Entry
MCFN_00330 CDS
T03247
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
mcr
Mycoplasmopsis californica ST-6
Brite
KEGG Orthology (KO) [BR:
mcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mcr03009
]
MCFN_00330 (rumA)
Enzymes [BR:
mcr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
MCFN_00330 (rumA)
Ribosome biogenesis [BR:
mcr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MCFN_00330 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_15
TRAM
MTS
TRM5-TYW2_MTfase
N6_N4_Mtase
Methyltransf_25
GCD14
RrnaAD
Cons_hypoth95
PrmA
CxC4
UPF0020
DUF5300
PCMT
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
AIA29245
UniProt:
A0A059XQG8
LinkDB
All DBs
Position
71391..72716
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AA seq
441 aa
AA seq
DB search
MEFKKGQILKDVEATQLSYEGMGVVKIDNYSIFVENLLPGEKADIFIQKANNKFGFARSI
KRVVLSPIRQEVINEALMDSGSTSLAMLPYEKQLEFKENFVTYLFGRNIHFEDVKKIIPN
QKPWGYRNKLTVFVKVVNNVIKLGLYRKNTHDLVEQSSYDLAYSEINKVILWLQKNINKY
YKIVRQGDLLESITFRFSQLENKMLVIFNVKNKMLFTESFIREFISQNSNIKNIIVTWND
KKKMNYQTLLCDDASLKDLVGNVQINYGWNSFFQVNTQQANILYTTLIDNLSLTNEDVVV
DAYSGAGSIALRIADKVKKVYGLEIINQAVLNAIQNAKLNGVDNAEFITGDVNSTIFKVK
EKVTTVIVDPPRAGLSSSFLATIVKMQPEKIGYISCNVHTMCRDVDLLQNNGYKLVFLQP
CDMFSQTHHIELVGVLIRNKK
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggaatttaaaaagggtcaaattttaaaagatgttgaagcaactcaactttcatatgaa
ggaatgggtgtagttaaaatagataactattctattttcgttgaaaatttattacctggt
gaaaaagcagatatttttattcaaaaagctaataataagttcggatttgctcgctctatc
aaaagagtggttttatccccgatacgtcaagaagttattaatgaagcgctaatggattct
ggctcaacatcgctagcaatgttaccgtatgaaaaacagttagaattcaaggaaaatttt
gtaacgtatttatttgggcgtaatattcattttgaagatgttaaaaaaataattcctaat
caaaaaccatgaggctatagaaataaattaactgtatttgtaaaagttgttaataatgta
attaaacttggattgtacagaaaaaatactcatgatttagttgagcaatcttcatatgat
ttagcatattctgagattaataaagtaattttatggctacaaaaaaatattaataagtat
tataaaatagtaagacagggcgatttattggaatcgataacatttagattttcgcaatta
gaaaataaaatgcttgttatatttaatgtcaaaaataaaatgctctttactgaaagtttt
attcgggaatttatcagtcaaaatagtaatataaaaaatataattgtaacctggaacgat
aagaaaaaaatgaattaccagacattactctgtgacgatgcttcgctaaaagatttggtt
ggtaatgttcaaataaattatggttgaaatagtttttttcaagttaacacgcaacaagcg
aatattttatacacaacattaattgataatttatcacttaccaatgaagatgtagtggtt
gatgcatactcaggggctgggtcaatagcattgagaattgctgataaagtgaaaaaagtt
tatggtttagaaataataaatcaagctgttttaaatgctattcaaaatgccaaactaaat
ggggttgataatgcagaatttataactggtgatgtaaatagcactatttttaaagttaaa
gaaaaagttacaacggttattgtcgacccaccgagagcaggattgagttcaagtttttta
gcaaccattgtaaaaatgcaacctgaaaaaataggatatatttcttgcaatgtgcatact
atgtgtcgtgacgtagatttattgcaaaataatggttataaattagtttttttacaacct
tgtgatatgttttcgcaaactcatcacattgaattggttggagtcttgattagaaacaaa
aaataa
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