Mycoplasmopsis californica ST-6: MCFN_01330
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Entry
MCFN_01330 CDS
T03247
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mcr
Mycoplasmopsis californica ST-6
Brite
KEGG Orthology (KO) [BR:
mcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mcr03016
]
MCFN_01330 (truB)
Enzymes [BR:
mcr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MCFN_01330 (truB)
Transfer RNA biogenesis [BR:
mcr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MCFN_01330 (truB)
Prokaryotic type
MCFN_01330 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
CATSPERB_1st
Motif
Other DBs
NCBI-ProteinID:
AIA29412
UniProt:
A0A059XVY7
LinkDB
All DBs
Position
296016..296858
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AA seq
280 aa
AA seq
DB search
MFYLLHKPKNISSFACIKKFARQMKIKKIGHSGTLDPLASGLLLLATDDDTKLLPYIKDK
TKTYKASIIFGQARSTYDEEGEITQTSENKINESDLNAVLEWFRTQNVQIPPIFSAKKIN
GTRAYDLARRKQEVQLKAQKIKIHEAQFISFNYQSQELVVKLKVSNGTYIRSLAHDIGQA
FNTCSYMSDLERTEISTLNNNLLVNNNFVAIINVLPLLSVASLMLSGDQIKVLQKGLLLP
IETTDGQYVITNQKNGTQVLGIIEVANSFARVVKLFGNRL
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgttttatttactacacaaacctaaaaatatttcttcatttgcttgcattaaaaaattt
gctcgtcaaatgaaaattaaaaaaataggccacagcggaacattagatccattggccagt
ggtcttcttctactcgctactgatgatgatacaaaacttttgccatatattaaggataaa
acaaaaacgtataaggctagcatcatttttggacaagctcgctcaacatatgatgaagag
ggagaaattacccagactagcgaaaataaaattaacgaaagcgatttaaacgctgtttta
gagtgatttagaacacaaaatgtccaaataccacctatttttagtgctaaaaaaattaat
ggtactcgtgcatacgatttagctcgccgtaagcaagaagttcaattaaaagctcaaaaa
ataaaaattcatgaagcacaatttatttcatttaactaccaatcccaagaattggtcgtt
aagcttaaagtctcaaatggcacctacattaggtcgctagcacatgatattggtcaagcg
ttcaatacatgctcatacatgagtgatttagaaagaactgaaatttccacattaaacaat
aatctattagtaaacaataattttgttgctataattaatgtcctgcctttactgagtgtt
gcttcattaatgttgagtggcgaccaaataaaagtcttgcaaaaaggacttttattgcca
attgagacaactgatgggcaatacgttatcactaaccaaaaaaacggcactcaggttcta
ggtattattgaggttgcgaatagttttgctcgtgtagttaaattatttggcaatcgatta
taa
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