Mycoplasmopsis californica ST-6: MCFN_01865
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Entry
MCFN_01865 CDS
T03247
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mcr
Mycoplasmopsis californica ST-6
Pathway
mcr03420
Nucleotide excision repair
mcr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MCFN_01865 (pcrA)
03430 Mismatch repair
MCFN_01865 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcr03400
]
MCFN_01865 (pcrA)
Enzymes [BR:
mcr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MCFN_01865 (pcrA)
DNA repair and recombination proteins [BR:
mcr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MCFN_01865 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
MCFN_01865 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
PcrA_UvrD_tudor
Glyco_hydro_106
PhoH
DUF5800
Motif
Other DBs
NCBI-ProteinID:
AIA29514
UniProt:
A0A059XLV1
LinkDB
All DBs
Position
complement(443978..446176)
Genome browser
AA seq
732 aa
AA seq
DB search
MSNNKTDKILLHLNTEQKEALLYFDGPLRIIAGAGSGKTRVLTRKIAYLINELAIPPSDI
LALTFTNKATNEMTQRIHQYTPPHLDRVQVSTFHSLCARILRAEAFHLNLPADFQIIDAT
DQKAIIKRLLPDFEMGEEDESMGVAEILRVISLAKNKNYNSAELVSELNDLYTENIELNE
RLGQIFDRYNSHLHELKSLDFDDLIIKTHELFTQNQSVATFWSNRFSYILVDEFQDTSRM
QYEIVKKLSGSKTQLTIVGDPDQTIYSWRGADVNLILNFDKDFANTKTIILKENYRSTQK
ILDAANNLIKHNQNRFHKDLVTNNASGEDIEYTHAFSNEAEARWVVQTINKLKKQKIQLK
NIAIFYRSNYYSRPFEEELIKENINHRIFNGLKFYQRKEIKDSLSYLRLIYDGLDLPLLR
IINTPSRKIGKLTLAQLQKFAAEKKMSLWQTFLNYAKDLPVSKEVKKNIVDLINNVNYHR
RALQSNPIHLVLEKFLNKIGYFEYLNTDVALKGTGKDNVNELIRSIKNWEENNKDKGIKE
YLEFVSLASAGDDYDNSTNYVTLMTVHSAKGLEFDNIFLVGMSEYIFPNVHALSSAKNED
LEEERRLAYVGITRAKKRLFISDSRGVLIGSQIQKKPSRFIKETGIDINKYILQKEAIST
NYDDITDHKQIKEINRSMIPGDIISHTHFGEGTVLEVNNDTIVVRFAGSNIGQEKTLSKN
HPSIRLLREEGQ
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaataacaaaactgataaaatacttttacatctaaacaccgagcaaaaagaagcg
ttgctttattttgatggccctttgcgaattattgcgggagcaggatcgggtaaaacaaga
gttttaactcgaaaaattgcctacttaattaatgaattagccattccaccttcggatatc
ttagccctaacctttactaacaaagctactaatgaaatgacacaacgtattcaccaatac
accccaccacatctagatcgtgtccaggtttccacgtttcactcactatgcgcaagaatt
ttgcgcgcggaagcatttcatctgaacctgccagccgattttcaaattattgatgccact
gaccaaaaagctataattaagcgtcttttacccgatttcgagatgggcgaagaggacgaa
agcatgggtgtagctgaaattttacgtgttatttcgcttgctaaaaataaaaactataat
tcagctgaattagtatcggaattgaacgacctttatactgaaaacattgaattaaatgag
cgtttaggccaaatttttgaccgatacaactcacacttgcacgagctaaaaagtcttgac
ttcgatgatttaatcattaaaactcacgaattatttacccaaaatcagagcgttgccaca
ttttggtcaaatcgcttctcttatatcttagttgatgagttccaagatacatcacgcatg
caatatgaaattgtcaaaaaattatctggaagcaaaactcaactaaccattgttggcgat
ccagatcaaacaatttattcttgacgtggcgcagatgttaacttaattttaaattttgac
aaagacttcgcaaacactaaaacaatcatcttaaaagaaaactaccgttcaactcaaaaa
attttagatgctgctaataacttgattaaacacaatcaaaatcgctttcacaaggatttg
gttactaataatgcaagtggcgaagatattgaatacactcacgcattcagtaatgaagct
gaagcgcgttgagtagtacaaacaataaataaacttaaaaaacaaaaaattcagctaaaa
aacattgctattttttatcgttcaaactattattctcggccattcgaggaagaattaatt
aaggaaaacattaatcaccgtatttttaatgggttaaaattctatcaacgtaaggaaatt
aaagattccttaagttacctacgactgatttatgatggacttgatttacctttattacgg
attataaatacaccttcacgcaaaataggtaaactaacgcttgctcaattgcaaaaattt
gctgccgaaaagaaaatgagcttgtggcaaacttttttaaattacgcaaaagatttacca
gtcagcaaagaggttaaaaaaaatattgttgacttaataaataatgtaaattaccatcgc
agagcgttacaatcaaatccaatccacttagtcttagagaaatttttaaacaaaattggt
tattttgagtacctaaacactgatgttgcactcaaaggtacaggcaaagataatgtgaat
gaattaattagatcaatcaaaaattgggaagaaaataataaagataaaggtattaaagaa
tatcttgaatttgtttcgttggcctcggctggcgatgattatgataactctactaactac
gtcactttaatgacagttcactcagcaaaaggtttggaatttgataacatctttttagta
gggatgtcagagtacatttttccaaatgtacatgccctaagtagcgctaaaaacgaagat
cttgaagaagaacgccgtcttgcctatgttggtataactcgcgccaaaaaacgtttattc
atttctgattctcgcggggttttaattggttcgcaaattcagaaaaaaccatcacgcttt
attaaggaaacgggtattgatattaataaatatattcttcaaaaagaagctatttcaaca
aattatgatgatataacagatcataagcaaataaaagaaattaatcgttcaatgattcct
ggagatattatttctcacactcactttggggaggggacggttctagaagtcaataatgat
acaattgtagttcgtttcgctggttcgaatataggacaagagaaaacactgtctaaaaat
cacccttcaatcagactgttgcgtgaggaaggacaataa
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