Mycoplasmopsis californica ST-6: MCFN_03445
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Entry
MCFN_03445 CDS
T03247
Symbol
recD
Name
(GenBank) RecD/TraA family helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mcr
Mycoplasmopsis californica ST-6
Pathway
mcr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MCFN_03445 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcr03400
]
MCFN_03445 (recD)
Enzymes [BR:
mcr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MCFN_03445 (recD)
DNA repair and recombination proteins [BR:
mcr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MCFN_03445 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
SH3_13
Viral_helicase1
UvrD_C_2
PIF1
UvrD-helicase
AAA_11
HHH_RecD2
AAA_22
SLFN-g3_helicase
AAA_12
NACHT
PhoH
NPHP3_N
AAA
NAT10_TcmA_helicase
MeaB
Motif
Other DBs
NCBI-ProteinID:
AIA29794
UniProt:
A0A059XMR5
LinkDB
All DBs
Position
complement(791390..793573)
Genome browser
AA seq
727 aa
AA seq
DB search
MNNEVNANTKKGTKNQIQLRGMFKKIISGGESNNWLWALAIFVSDEGENHTVYCKGRALK
LMTHYDVVLSENFNDKYKNKNLVSLSISQPKNNEELKKVLLRTNTGIGRATIEKLDKQFG
EDWIDSFLKNPEIFKEKINEKTFTSLDNFFKTYTNKSYNFFLSHGLEKLYDALKIDFSEG
DLIEELKKINPYTLVYTHNYSFSKIDDLGIALELHNSIERLYALIYHSIEKEINSNNSTK
IKMNYILEAVKTDFLNYSDKVILDAITYMINNAFIVYWDDTGLFSTHSIVRKENYIAVRL
SRLKKIALKISNYQAHSSISKLQQEAFMNAIINSVSVISGFPGTGKSFVIKNIIEFLISE
KLFKKEEIVIVTPTGRAAVNLKAKSGVDAKTIHSYFKISDTPFKSTLSCQLTENTHKVLV
IDEFSMVNTDLFYTVLYNSPDLEKLILVGDADQLPCIGAGNLLDDIIESNKFQTTKLVEI
FRTDHRDIAEHFLAVREFKEPRYNTENIEWYDANNIDFKDKLLSIYQEKVDRFGIQNVAL
LIPLHKTPHGTIKMNMLLQEWNLYRQNLNIEDIPSIKIGAGENAKIFYLGDKVVQNENDY
DLNVYNGEIGFIESIDKEGKKITINFDYKKIEYSRDQFIQYITLGYALTVHKFQGSESSC
VIFPVLPEYDYLFETKLIYTAVSRSKENLVILGDLGYYREKVLKGHKKEKTLTNFADSIQ
MEELWNL
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaataatgaagtaaatgcaaatacgaaaaaaggaaccaaaaatcaaatccaattaagg
ggaatgttcaaaaaaataattagcggcggagagtcaaataattgattgtgagcattggca
atttttgtttctgatgagggcgagaatcacacagtttattgcaaaggtagggcattaaaa
ttaatgacgcattatgatgttgtgctgtcggaaaattttaatgataaatataaaaacaaa
aatctagtttcattatcaatcagtcagccgaaaaataacgaagagctaaaaaaagtgcta
ttaagaactaatacaggtattggccgagcgacaatagagaaattggacaagcaatttgga
gaagattggatcgattcgtttttaaaaaatccagaaatatttaaagaaaaaataaacgaa
aaaacatttacttcattagataatttttttaaaacctacacaaacaaaagttataacttt
tttctaagccatggattagaaaagttatatgatgcattaaaaattgatttttcagagggt
gacctaattgaggaattgaaaaaaatcaatccttacacactcgtttacactcataattac
tcattttctaaaatagatgatttaggtatagcgttggaattgcacaacagcattgagcgt
ctttatgcattaatttatcattcgattgaaaaagaaattaattctaataactctacaaaa
ataaaaatgaattacatattggaagctgttaaaactgattttttaaattatagtgataaa
gtaattttagatgctattacatatatgattaataatgctttcattgtatactgagatgat
acaggattattttctactcattcgattgttagaaaagaaaattatatagccgttaggtta
tctagattaaaaaaaattgccttaaaaataagtaattatcaagcccatagcagtatttct
aaacttcaacaagaagcatttatgaatgcgattataaattcagttagtgttatttcaggg
ttcccgggcaccgggaaatcatttgtgattaaaaacattatagagtttttaataagtgaa
aaattattcaaaaaagaagaaatagttattgtaactcctactggaagagcggccgtaaac
ttaaaagctaagtcaggtgtagatgctaaaacaattcatagttattttaaaataagtgat
accccttttaaatcaaccctatcttgccaattaacagaaaacactcataaagtattggta
attgatgagttttcgatggttaatactgatttattttatacagtcctttacaattcgcca
gatcttgaaaaactaattttagtaggtgatgccgaccaattaccatgtataggggccggt
aatttgcttgatgatattattgaatctaataaatttcaaacaacaaaattggttgaaatt
tttagaacagaccacagagacatcgctgaacattttttagcagttagagaatttaaagaa
cctcgttataacaccgaaaacattgaatggtatgatgctaacaatattgattttaaagat
aaattattatccatttatcaagaaaaagtcgatcgttttggcatacaaaatgtcgcttta
ttaattccacttcataaaactcctcatggaacaattaaaatgaatatgttgttgcaagaa
tggaatttatatcgtcaaaacctgaatattgaagatataccttcaattaagataggcgcg
ggtgaaaatgctaaaattttttatctaggtgataaagtggtgcaaaatgaaaacgattat
gatttaaatgtctataatggtgaaataggttttattgaatcgattgataaagaaggtaaa
aaaatcactattaattttgattataaaaaaattgaatattcacgtgaccaatttattcaa
tatattaccttagggtatgcccttactgttcataaatttcaaggttcagaaagttcatgt
gttatattccctgttcttccagaatatgattatttatttgaaactaaattaatttataca
gctgtttctcgctcgaaagaaaatttagtgatattaggtgatttaggatactatcgtgaa
aaagttttaaaaggtcacaaaaaagaaaaaacactaactaattttgcagattctattcaa
atggaggaattatgaaacttatag
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