Micromonospora craniellae: ID554_01450
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Entry
ID554_01450 CDS
T06957
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mcra
Micromonospora craniellae
Pathway
mcra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ID554_01450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcra03019
]
ID554_01450
03009 Ribosome biogenesis [BR:
mcra03009
]
ID554_01450
Enzymes [BR:
mcra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ID554_01450
Messenger RNA biogenesis [BR:
mcra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ID554_01450
Ribosome biogenesis [BR:
mcra03009
]
Prokaryotic type
rRNA helicases
ID554_01450
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
WSD
Motif
Other DBs
NCBI-ProteinID:
QOC92487
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All DBs
Position
319850..321547
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AA seq
565 aa
AA seq
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MSSTPVPPDATMDPPAFTDLGLRSELLAALAALGYEEPTPIQREAIPTLLTGRDLLGQAA
TGTGKTAAFALPLLQRMPDDRPGGDPLALVLVPTRELAVQVSEAFHRYGKDLGARVLPIY
GGQPIGRQLRALDSGVDVVVATPGRALDHIARGTLRLGNLITVVLDEADEMLDMGFAEDI
EAILEHAPEQRQTVLFSATMPSRIEGMARAHLTDPVRILIAREQPVAGAAPRVRQSAYLV
ARAHKPAALGRVLDVESPTAAIVFCRSREEVDRLTETMNGRGYRAEALHGGMSQEQRDRV
MGRLRSGTADLLVATDVAARGLDVEQLSHVVNYDVPSAPESYVHRIGRVGRAGREGVAIT
LAEPREHRMLKTIERVTGQRITIDKIPTVADLRTRRLELTQAALRESLLEDDLEPFRVIV
ETLSDEFDLMEVALAAVKLAHEATLPGSDEAEEEIPQVAVRPPRDTRPGQDTRGDRRPAR
PRTGGMTQVFIGLGRRAGVRPQDLVGAITGETGIRGRDIGSIEIADRFSLVEVPNGLADE
VIAGLRGSTIKGRKATVRRDRDERR
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgagttccacgcccgtaccccccgacgcgaccatggatccgcccgccttcacggacctc
ggcctgcggtccgaactgctcgccgcactcgccgcactcggctacgaggagccgacgccg
atccaacgggaggcgatcccgaccctgctgaccggccgtgacctgctcgggcaggcagcc
acgggtacgggcaagacggccgcgttcgcgctgccgctgctgcaacggatgccggacgac
cgacccggcggcgatcccctcgcgttggtgctggtgcccacccgggaactcgcggtgcag
gtgtccgaggcgttccaccggtacggcaaggatctcggtgcgcgggtgctgccgatctac
ggtgggcagccgatcggccgccagctgcgggcgctggactccggcgtggacgtggtggtg
gccactcccgggcgtgccctggaccacatcgcccggggcacgctgcggctcggcaacctg
atcaccgtcgtgctcgacgaggccgacgagatgctggacatggggttcgccgaggacatc
gaggcgatcctggagcacgcccccgagcagcgtcagacggtcctcttctcggcgaccatg
ccgtcgcgcatcgagggcatggcccgggcgcatctgaccgacccggtccggatcctcatc
gcccgcgagcagccggtggccggcgcggcgccccgggtacggcagagcgcgtacctggtg
gcgcgggcgcacaagccggcggcgctgggccgggtgctggacgtcgagtcgcccaccgcg
gcgatcgtcttctgccgcagccgggaggaggtcgaccggctcaccgagacgatgaacggg
cgcggttaccgggccgaggccctgcacggcgggatgagccaggagcagcgggacagggtg
atgggccggctacggagcggcaccgccgacctgctggtggccaccgacgtcgccgcccgg
ggactcgacgtcgagcagctcagccacgtggtcaactacgacgtgccgtcggcgcccgag
tcgtacgtgcaccgcatcggccgggtcggccgcgccggtcgggagggtgtggcgatcacc
ctggccgagccccgggaacaccggatgctcaagaccatcgagcgggtgaccggccagcgg
atcacgatcgacaagatccccaccgtcgccgatctgcggacccgccggctggaactgacc
caggcggcgctgcgggagagcctgctggaggacgacctggagccgttccgggtcatcgtc
gagacgctcagcgacgagttcgacctgatggaggtggccctcgccgcggtgaagctggcc
cacgaggcgaccctgcccggctccgacgaggccgaggaggagatcccccaggtggcggtc
cgcccgccccgggacacccgtcccggccaggacacccggggcgaccgccggccggcgcga
ccccgtaccggcggcatgacccaggtcttcatcgggctgggccggcgtgccggagtccgg
ccgcaggacctggtcggggcgatcaccggggagaccggcatccgtggccgggacatcggc
tcgatcgagatcgccgaccggttctccctggtcgaggtgcccaacgggttggccgacgag
gtgatcgccgggttgcgcggcagcaccatcaagggccgcaaggccaccgtacgccgcgac
cgcgacgagcgtcgctga
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