Micromonospora craniellae: ID554_10810
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Entry
ID554_10810 CDS
T06957
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mcra
Micromonospora craniellae
Brite
KEGG Orthology (KO) [BR:
mcra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcra03032
]
ID554_10810 (topA)
03400 DNA repair and recombination proteins [BR:
mcra03400
]
ID554_10810 (topA)
Enzymes [BR:
mcra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ID554_10810 (topA)
DNA replication proteins [BR:
mcra03032
]
Prokaryotic type
DNA Topoisomerases
ID554_10810 (topA)
DNA repair and recombination proteins [BR:
mcra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ID554_10810 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
MarR_2
HC2
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QOC94048
LinkDB
All DBs
Position
complement(2437094..2439934)
Genome browser
AA seq
946 aa
AA seq
DB search
MPSKAGTTRLVIVESPAKAKTISGYLGPGYVVEASFGHVRDLPRNAADVPAKYKGESWAR
LGVDVDNGFHALYVVSADRKQQISKLTKLAKEVDEIFLATDEDREGEAIAWHLVETLKPK
VPVRRMVFHEITKPAIQAAVANPREIDRDLVDAQEARRILDRLYGYEVSPVLWKKVMPRL
SAGRVQSVATRIVVERERQRMAFRTAEYWDILATLAVTNVGEGPRSFNATLVALNGDRIA
TGKDFEPTTGRVRAGAGVVHLDESGARGLAARLEGRPFTVTRVEEKPYRRRPYAPFITST
LQQEAARKLRFSSQQTMRTAQRLYENGYITYMRTDSVSLSDTAIAAARQQIVELYGERSV
PPEPRRYTGKVKNAQEAHEAIRPAGDNFRTPGEVAKELSVEEFKLYELIWRRTIASQMTD
AVGSSVSVRIRATTVGGEEADFGATGKTITDPGFLRAYVESSDDENAEAEDAERRLPNLV
KDQPLTAERLAAQGHHTQPPARYTEASLVKALEELGIGRPSTYASIMQTIQDRGYVVKRG
QAMIPSFLAFAVIGLMERHYPRLIDYDFTASMENELDEIAGGDHAAVDFLTAFYFGTTNG
AGDQDIARSGGLKKLVTENLSDIDARSVNSIPLFSDDEGREVVVRVGRYGPYLQRRTPGE
EQAPVAEGEEGAAPGDRAPIPEGLAPDELTPEKVHELFLGGGGERKLGDDPATGEPILLK
SGRFGPYVASGERKSSLLRSQSPDSLSLDEALKLLSLPRVIGVAADGAEVVANNGRYGPY
VKRGDEFRSLDSEDKMFTVTLDEALALLAAPKNRQRRAAAPPLREMGADPLTEKPLVIKD
GRFGPYVTDGETNASLRRGQTPEALSLEEASEMLAEKRAKGPAPRRKATKKAAAKKAPAK
ATDPKTAAAKTTASKTTASKTASKAAASKATPRKAAPRKATAPRTD
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
gtgccgagcaaagctggaaccacccgtctggtcatcgtcgagtccccggcgaaggccaag
acgatctcgggctacctcggcccggggtacgtcgtggaggccagcttcgggcacgtccgc
gacctgccgcgtaacgccgccgacgttccggccaagtacaagggcgagtcctgggcccgg
ctcggcgtcgacgtcgacaacggcttccacgccctctatgtcgtctccgccgaccgcaag
cagcagatcagcaagctgaccaagctggccaaggaggtcgacgagatcttcctggcgacg
gacgaggaccgcgagggcgaggcgatcgcctggcacctggtggagacgctcaagccgaag
gtgccggtccggcggatggtcttccacgagatcaccaagccggcgatccaggcggcggtg
gccaacccccgggagatcgaccgtgacctggtcgacgcccaggaggcccggcgcatcctc
gaccgcctctacggctacgaggtctccccggtgctgtggaagaaggtcatgccgaggctc
tcggcgggccgggtgcagtccgtggcgacccggatcgtggtcgaacgcgagcggcagcgg
atggccttccgcaccgccgagtactgggacatcctggccaccctcgccgtgacgaacgtc
ggcgagggaccgcgcagcttcaacgccactctggtcgcgctgaacggcgaccggatcgcc
accggcaaggacttcgagcccaccaccggccgggtgcgcgccggtgccggcgtggtgcac
ctcgacgagagcggtgcgcgggggctcgcggcccgcctcgaagggcgaccgttcaccgtc
acccgggtcgaggagaagccctaccgccgccgcccgtacgcgcccttcatcacctccacg
ctccagcaggaggcggcccgcaagctgcggttctcgtcccagcagacgatgcgtaccgcg
cagcggctctacgagaacggctacatcacctacatgcgtaccgactcggtgagcctgtcg
gacaccgccatcgcggcggcccgccagcagatcgtcgagctgtacggcgagcgcagcgtg
ccgccggagccgcgccgctacaccggcaaggtgaagaacgcgcaggaggcgcacgaggcg
atccgcccggcgggggacaacttccgcaccccgggtgaggtggccaaggagttgtcggtc
gaggagttcaagctctacgagctgatctggcggcgcaccatcgcctcgcagatgaccgac
gcggtcggttccagcgtctcggtgcggatccgggccaccaccgtcggcggcgaggaggcc
gacttcggcgcgaccggcaagacgatcaccgacccgggtttcctgcgcgcgtacgtcgag
tccagcgacgacgagaacgccgaggccgaggacgccgagcgccggctgcccaacctggtg
aaggaccagccgctgaccgccgagcgtttggcggcgcagggccaccacacccagccgccc
gcccgctacaccgaggcgtcgctggtcaaggcgcttgaggagttgggcatcggccgcccc
tccacgtacgcgtcgatcatgcagaccatccaggaccgtggctacgtcgtcaagcgtggc
caggcgatgatcccgtcgttcctcgcgttcgcggtgatcgggctgatggaacggcactac
ccgcgcctgatcgactacgacttcacggccagcatggagaacgagctggacgagatcgcc
ggcggcgaccacgcggccgtcgacttcctcacggcgttctacttcggcaccaccaacggc
gccggtgaccaggacatcgcccgttccggcgggctcaagaagctggtcaccgagaacctc
agcgacatcgacgcgcgtagcgtcaactcgatcccgctgttcagcgacgacgagggacgc
gaggtggtggtgcgggtcggccgatacgggccgtacctgcagcgtcggacgccgggcgag
gagcaggcgccggtcgccgagggtgaggagggtgcggcgccgggagaccgggcgccgatc
cccgagggcctggcgccggacgagttgaccccggagaaggtccacgagctgttcctcggt
ggcgggggcgagcgcaagctcggcgacgacccggcgacgggagagccgatcctgctcaag
tccggccggttcggcccctatgtggccagtggcgaacggaagtcctcgctgctgcgctcg
cagtccccggactcgctcagcctcgacgaggcgctcaagctgctcagcctgccccgggtg
atcggggtggcagcggacggtgccgaggtggtcgccaacaacggccgctacggcccgtac
gtcaagcggggcgacgagttccgttcgctggactcggaagacaagatgttcaccgtcacg
ctggacgaggcgctggccctgctggccgccccgaagaaccggcagcgtcgggccgccgcg
ccgccgctgcgggagatgggcgcggacccgctgacggagaagccgctggtcatcaaggac
ggccggttcgggccgtacgtcaccgacggggagacgaacgcctcgctgcgacgcggccag
accccggaggcgctgagcctggaggaagcttccgagatgctcgccgagaagcgggcgaag
ggtccggctccgaggaggaaggcgacgaagaaggccgccgccaagaaggcgcccgccaag
gccaccgacccgaagaccgctgccgccaagaccaccgcgagcaagaccaccgcctcgaaa
acagcctcgaaggcagcagcctcgaaggccacgccgaggaaggcagcaccgagaaaggcc
accgccccccgcaccgactga
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