Micromonospora craniellae: ID554_20030
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Entry
ID554_20030 CDS
T06957
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mcra
Micromonospora craniellae
Pathway
mcra03420
Nucleotide excision repair
mcra03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ID554_20030
03430 Mismatch repair
ID554_20030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcra03400
]
ID554_20030
Enzymes [BR:
mcra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ID554_20030
DNA repair and recombination proteins [BR:
mcra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ID554_20030
MMR (mismatch excision repair)
Other MMR factors
ID554_20030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QOC90455
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All DBs
Position
4407877..4411236
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AA seq
1119 aa
AA seq
DB search
MTQPALFNPAAPAPRAAAVGPRYTPVELAKLLRLPAPTREQAAIIAAPVEPLLVVAGAGS
GKTETMAARVVWLVANSYVRPEQVLGLTFTRKAAGELAHRVRTRLDQLVRRLGRRGRDPL
DDPFAGEPTISTYHSYAGRIVTEHGLRAGYEPSTRLLTEASRWQLVDLIVRNYDGDMSEV
DRMPSTVTDAVLALSGELDEHLVDPDALAAWTGRFFAEVQSRPGRVYADVRRALALQQTR
LKLLPLVRAYARRKDDFEAMDFADQLARAARVARDHPGVGEIERGRYRVVLLDEYQDTSH
AQVVLLGALFGGGHPVTAVGDPCQSIYGWRGASAGTLDRFPTEFARADAEPARMLGLTTS
WRNRPEILAVANALATPLRAAGAQVPELHAALSVRDPIPHRSARGAAAGTVHCALLSTYA
DEADWIADSVLAAWRGAARLPGVLPEQIPVTLRPTTAVLVRLRSQIPAIAAALRERGLPV
EVVGLGGLLDTPEIRDVVCTLRVLADPTDGAALLRLLTGARWRIGPRDLVALHRRAKAIA
AARRQLADDGTAEIMPDRLDEATLVEALADLGPAQAYSAEGYLRLRAYARELGLLRYRLD
QSLPELIADVERTTGLDVEVAVRAGGDGAGDAGLARSHLDALGDVAARFSGETPGATLAG
FLAYLAAAEDEERGLAPGEVEVVEGAVQILTAHAAKGLEWDVVSVAGLSRGVWPGPVRNS
DHWLGGLGVLPFPLRGDAHGLPELALAEVDDQRGVARAVEDFTDAWRAHDEREERRLAYV
AVTRPRRLLLCSGHWWGEGTKRPRGPSGLLREVHDACLDAGAGHLVDEWVPEPSPDAVNP
TTEVVIRAEWPADPLGVRRPPLTEAAALVRRFLTDDGPTAPDDETPDPEVARWRREADLL
LAERAELSRLSGPVEVALPEHLSVTQLVALRRDPAALARALRRPLPTEPNPYARRGTAFH
AWLEQRFGADRLLDTDELPGAADADAAPDEALAELQRRFLGSEWAERTPVEVEVPFATVI
GGVVVRGRMDAVFRRPGDRFDVVDWKTGAQPSGAAAEVASVQLAVYRLAWAELAGVPVDR
VGAAFHYVRDGATVRPADLLDVDGLSALITSLPEFGLDR
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgacccagcccgcgctgttcaaccccgcggcgccggcgccccgggcggccgccgtcggt
ccccggtacacgccggtggaactggccaagctgctgcggttgccggcgccgacccgggaa
caggcggcgatcatcgcggcgccggtggagccgctgctggtggtcgcgggagccggttcg
ggaaagaccgagacgatggccgcccgggtggtctggctggtggccaactcgtacgtccgg
cccgagcaggtgctcggtctgaccttcacccgcaaggccgccggtgagctggcgcaccgg
gtgcgtacccggctcgaccagttggtgcgccggctggggcggcgcggacgggacccgctc
gacgaccccttcgcgggcgagcccacgatttccacctaccactcgtacgccgggcggatc
gtcaccgagcacggcctgcgggccgggtacgagccctccacccggctgctcaccgaggcg
tcccgctggcagctcgtggacctgatcgtgcgcaactacgacggggacatgtccgaggtg
gaccggatgccgagcacggtcaccgacgcggtgctggcgctctccggcgaactggacgaa
cacctggtcgacccggacgccctggccgcgtggaccggccggttcttcgccgaggtgcag
tcccgtcccggacgggtctacgccgacgtgcgcagggccctcgcgctccagcagacccgg
ttgaagctgctgccgctggtgcgcgcgtacgcccggcgcaaggacgacttcgaggcgatg
gacttcgccgaccagctcgcccgggccgcccgggtggcccgggaccatcccggcgtcggc
gagatcgagcgcgggcgctaccgggtggtgctgctcgacgagtaccaggacaccagccac
gcccaggtggtgctgctcggcgcgctgttcggcggcgggcatccggtgaccgcggtgggt
gacccctgtcagtcgatctacggctggcggggggccagcgccggcaccctggaccgcttc
ccgaccgagttcgcccgcgccgacgccgaacccgcccggatgctcgggttgaccaccagt
tggcgaaaccggccggagatcctcgcggtggcgaacgcgctggccaccccgctgcgggcg
gccggtgcccaggtgcccgagctgcacgccgcgctcagtgtccgcgatccgatcccgcat
cgcagcgcacgcggcgccgccgccggcaccgtgcactgcgcgctgctgtcgacgtacgcc
gacgaggccgactggatcgccgacagcgtgctggccgcctggcggggtgcggcgcggctg
ccgggggtgctgcccgagcagatcccggtcactctgcgcccgaccacggcggtgctggtg
cggctgcgcagccagattccggcgatcgcggcggcgctgcgcgagcgtggcctgccggtc
gaggtggtgggactgggcggactgctggacactccggagatccgcgacgtggtgtgcacg
ctgcgggtgctggccgacccgaccgacggtgccgcgttgctgcggctgctgaccggtgcc
cggtggcggatcgggccacgggacctggtcgccctgcaccgccgggccaaggccatcgca
gcggcccgtcgccagctcgccgacgacggtacggccgagatcatgccggaccgcctggac
gaggcgaccctggtcgaggcgctggccgacctcggcccggcgcaggcgtactcggccgag
ggctacctgcggctgcgtgcgtacgcccgggagttgggcctgctgcggtaccggctggac
cagtcgctgccggagctgatcgcggacgtggagcggaccaccggtctggacgtggaggtg
gcggtacgggccggcggcgacggcgccggtgacgccggcctggcccgcagtcacctggac
gcgctgggcgacgtggccgcgcggttcagcggggagacgccgggggccacgctcgccggt
ttcctggcctacctggccgccgccgaggacgaggagcgcgggctggcacccggtgaggtg
gaggtggtcgagggggcggtgcagatcctcaccgcgcacgcggccaaggggctggagtgg
gacgtcgtctcggtggccgggctgagccggggggtgtggccgggaccggtccgcaactcc
gaccactggctgggcgggctgggggtgctgccgttcccgttgcgcggcgacgcccacggg
ttgcccgagttggccctggccgaggtcgacgaccagcgtggcgtggcccgggcggtggag
gacttcaccgacgcctggcgggcccacgacgagcgggaggaacgccggttggcgtacgtc
gcggtgacccgcccgcgtcgcctgctgctctgctccggccactggtggggtgagggcacc
aaacgcccgcgcgggccgtccgggctgctgcgcgaggtgcacgacgcctgcctggacgcc
ggggccggtcacctggtggacgagtgggtgcccgaaccgtcgccggacgcggtgaacccg
accaccgaggtggtgatccgggccgagtggccggccgacccgctgggcgtacgccgtccc
ccgttgaccgaggcggcggcgctggtgcggcggttcctgaccgacgacgggccgaccgcc
ccggacgacgagaccccggatccggaggtggcccggtggcggcgggaggccgacctgttg
ctcgccgagcgggcggagctgagcaggctgtccggcccggtcgaggtggcgctgcccgag
cacctgtcggtcacccagttggtcgcgttgcgccgcgacccggcggcgttggcccgggcg
ttgcgccggccgctgccgaccgaaccgaacccgtacgcccgccggggtaccgccttccac
gcctggctggagcagcggttcggcgcggaccggctgctcgacaccgacgagttgcccggt
gcggcggacgccgacgcggcaccggacgaggcgctggcggagctgcaacggcggttcctg
ggcagcgagtgggcggagcgtacgccggtcgaggtggaggtgccgttcgcgacggtgatc
ggcggcgtggtggtacgcggccggatggatgccgtgttccgccgtcccggcgaccgcttc
gacgtggtcgactggaagaccggcgcccagccctccggcgcggcggccgaggtggcctcg
gtgcagttggcggtctaccggctggcctgggccgagctggccggtgtcccggtcgaccgg
gtgggtgcggcgttccactacgtgcgggacggggcgaccgtccgtccggcggacctgctc
gacgtcgacggcctgtccgccctgatcacctcgttgccggaatttgggctggacaggtag
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