Mycolicibacterium crocinum: MI149_01140
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Entry
MI149_01140 CDS
T08227
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mcro
Mycolicibacterium crocinum
Pathway
mcro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MI149_01140 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcro03400
]
MI149_01140 (recD)
Enzymes [BR:
mcro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MI149_01140 (recD)
DNA repair and recombination proteins [BR:
mcro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MI149_01140 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
UvrD_C_2
Viral_helicase1
AAA_11
AAA_22
UvrD-helicase
NAT10_TcmA_helicase
RecD_N
SH3_13
AAA_16
AAA_28
nSTAND3
Mg_chelatase
PhoH
DUF3322
TraI_hel_assoc_N
Herpes_Helicase
AAA_29
T2SSE
AAA_5
NTPase_1
CbiA
SRP54
SLFN-g3_helicase
TrwB_AAD_bind
NACHT
DO-GTPase1
KfrA_N
AAA_25
AAA_7
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ULN41786
UniProt:
A0ABY3TK10
LinkDB
All DBs
Position
223648..225405
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AA seq
585 aa
AA seq
DB search
MTVEVTDPSDWRLCVDATGLLRAFNEAGAIEASDVLVAQRLTALGKESNELVALAIAFVV
RAVRGGSVCVELAAVPEQVDIDGLPWPEPQAWLAAVAASPLLSAPAVLHLDDDLLYFDRY
WLEERQVATDVLTLAGVRSSRQLPDIARLFPAGYDEQRRVAEVALSQGLTVLTGGPGTGK
TTTVARLLALLAEQAELEVKPPLRIALAAPTGKAAARLQEAVQAEVDKLSSADRARLQGL
RATTLHRLLGPLPRTSARFRHHRENRLPHDVIVVDETSMVSLTMMARLVEAVRPDSRLLL
VGDPDQLASVEAGAVLADLVEGLSARGDTPVAKLITPHRFGASIGALALAIRVGDANRAI
DVLNAGGEHIEWVDTEEPADALRRVLVPHAIRLREAAVLGNGQAALTTLDEHRLLCAHRR
GPHGVAYWNRQVERWLAEETDAPLWASWYAGRPVLVTANDYGLRLYNGDIGVTVLRDGVL
RAVMAGADGPAEFATSRLADIETMHAMTIHKSQGSQVSEVTVLLPPTDSRLLSRELLYTA
VTRAKTKVRVVGSAEQLRAAVGRRAARASGLSRRLTAVTPNVTPE
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcgaagtgaccgacccgtcggattggcggctgtgcgtcgacgccaccggcctg
ttgcgcgcgttcaacgaagcgggcgcgattgaggcctccgatgtccttgtcgcacaacgg
ctgacagctctgggtaaggagtccaacgagctggtcgcactggcgatcgcgttcgtggtg
cgagcggtgcgcggcggctcggtgtgcgtggagctcgcggcggtgcccgagcaggtcgac
atcgacggcctgccgtggccggaacctcaggcgtggttggccgccgtcgcggccagcccg
ttgctcagcgcgccggccgtgctgcacctcgacgacgacctgctgtatttcgaccggtac
tggctggaggaacgccaggtcgccaccgatgtactgacgttggcgggtgttcgaagcagc
cgtcaattacccgacatcgcacggcttttcccggccggttacgacgagcaacgccgggtc
gccgaagtcgcactgtctcagggactgaccgtactgaccggcggaccgggcaccggcaag
accaccacggtggccaggctgctggcgctgctggcggagcaggccgagctggaggtaaag
ccaccgctgcgcatcgcgttggccgcgccgaccggcaaggcggccgctcggctgcaggag
gcggtgcaggccgaggtcgacaagctgtcgtctgccgaccgagcccggctgcagggactg
cgcgccaccacgctgcaccgtctgctgggtccgctgcccaggacgtcggcacggtttcgg
caccaccgtgagaatcggctgccgcatgacgtgatcgtcgtcgacgagacgtcgatggtg
tcgctcacgatgatggcgcggctggtcgaggcggtccggccggattcgcggctgctcctc
gtcggcgatcccgaccagctcgcatcggtggaagccggtgcggtactggccgatctcgtg
gaggggctcagcgcgcgcggcgacaccccggtggccaaactgatcaccccgcaccgtttc
ggtgcgtcgatcggcgcgctggccctggcgatccgggtcggtgacgccaaccgcgccatc
gacgttctcaacgccggcggtgagcacatcgagtgggtcgacaccgaagaaccggccgat
gctctgcgccgggtgctggtgccgcacgcgattcggctgcgtgaggcggcggtgctgggt
aacgggcaggccgcattgaccacgctggacgagcaccggttgctctgtgcgcatcggcgc
ggaccacatggggtggcgtactggaaccgtcaggtcgagcggtggctggccgaggagacc
gatgcgccgctgtgggcgtcctggtatgcgggacgaccggtgttggtcaccgccaacgac
tacgggttgcggctgtacaacggcgacatcggcgtgacggtgctgcgcgacggggtgttg
cgcgcggtgatggccggcgccgacggtcccgccgagttcgcgaccagccggctggccgat
atcgagaccatgcatgcgatgaccatccacaagagccagggctcccaggtttctgaggtg
actgtgcttctgccgccgactgattcgcgtctgctgagtcgcgagctgttgtacaccgcg
gtgacccgggcgaagacgaaggtgcgggtggtgggctcggccgagcagctccgtgccgcg
gtggggcgacgggcggcgcgcgcgagcgggctcagccgccggctgactgcagtgacgccg
aacgtcacaccagagtga
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