Mycolicibacterium crocinum: MI149_12535
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Entry
MI149_12535 CDS
T08227
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mcro
Mycolicibacterium crocinum
Brite
KEGG Orthology (KO) [BR:
mcro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mcro03016
]
MI149_12535
Enzymes [BR:
mcro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
MI149_12535
Transfer RNA biogenesis [BR:
mcro03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
MI149_12535
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
ULN43818
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Position
complement(2549254..2550537)
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AA seq
427 aa
AA seq
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MSEYDDDAADAAPDAAADEAPEATPLLCPSEGVPPVSVSVDEIARAADQLAKGTGPFAVD
AERASGFRYSNRAYLIQIRRTGAGTVLIDPVNHGSSPIDVLRPVAEVLAEDEWILHAADQ
DLPCLAEVGMRPPALYDTELAGRLAGFERVNLAAMVQRLLGLGLAKGHGAADWSKRPLPD
AWLNYAALDVEVLVELREAIAGELAEQSKSDWAAEEFEYLRSAEPTVTRRDRWRRTSGIH
KVRNRQALAAVRELWTVRDQIARRRDIAPGRILPDSAIIAAAVADPKTVEELTKLPIFGG
HKQRRSAHVWLAALESARTNPDPPDSAEPQNGPPPAVRWAKRKPEAAARLDAARARLSEL
SERVHVPTENLVSPELIRRLCWDWQETNNVRGAVDTFLRDGGARTWQRALVVPVLTEALS
SPAAEAD
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaatacgacgatgacgccgcggacgcggcgcccgatgccgcagccgacgaagcc
cccgaagcgactcccctgctgtgcccgtccgagggcgtgccaccggtgtcggtcagcgtc
gacgagatcgcccgcgccgccgatcaactcgcgaagggcaccgggccattcgccgtcgac
gccgaacgcgcgtcgggtttccgctactccaaccgcgcctacctgatccagatccggcgc
accggcgcgggaaccgtactgatcgacccggtcaaccacggcagcagcccgatcgacgtg
ctgcggccggtggccgaggtgctggccgaagacgagtggatcctgcacgccgccgaccag
gacctgccgtgtctggccgaggtggggatgcggccgccggcgctctacgacaccgaattg
gcaggccgccttgccggtttcgagcgggtgaacctggcggcgatggtgcagcgcctactc
gggctcggtctcgccaagggtcacggcgcggcggactggtccaaacgcccactgccggac
gcctggctgaactacgccgcgctcgacgtcgaggtgctggtggagctgcgcgaggcgatc
gccggcgagctggccgaacagagcaaatccgattgggccgcagaggaattcgaatatctc
cggtccgccgagccgacggtgacccgccgcgaccggtggcggcggacgtcaggtatccat
aaggttcgcaaccgccaggcgctggccgcggtgcgcgaactctggaccgtgcgcgatcag
atcgcccgccgccgggacatcgccccgggacggatcctgccggattcggcgatcatcgcc
gcggccgtggccgacccgaagaccgtcgaggagctgaccaagctgccgatcttcggcggg
cacaaacagcgccggagcgcccacgtctggctggccgctctggagtcggcccgcaccaac
cccgatccgcccgacagcgccgaaccgcagaacggtccgccgcccgcggtgcgctgggcc
aaacgcaaacccgaggccgccgcacgcctggacgccgcgcgtgcgcgcctgtccgagctc
tccgagcgggtgcacgtccccacggagaacctggtctcccccgaactcattcgcaggctg
tgctgggactggcaggaaaccaataacgtccgcggagcggtcgacacgttcctgcgcgac
ggcggagcgaggacatggcagcgcgcattggtcgtgccagtactcaccgaagcgctgagt
tcacctgccgccgaagcggattga
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