Mycolicibacterium crocinum: MI149_15030
Help
Entry
MI149_15030 CDS
T08227
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mcro
Mycolicibacterium crocinum
Pathway
mcro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MI149_15030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcro03019
]
MI149_15030
03400 DNA repair and recombination proteins [BR:
mcro03400
]
MI149_15030
Enzymes [BR:
mcro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MI149_15030
Messenger RNA biogenesis [BR:
mcro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MI149_15030
DNA repair and recombination proteins [BR:
mcro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MI149_15030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
DUF3553
MarR_2
AAA_30
Glyco_hydro_57
Cas3-like_C_2
PcrA_UvrD_tudor
TrmB
Fe_dep_repress
MarR
Motif
Other DBs
NCBI-ProteinID:
ULN39102
LinkDB
All DBs
Position
3068574..3070214
Genome browser
AA seq
546 aa
AA seq
DB search
MSRRTELQRVANDMFGWPELRPAQLEAMEAVLAGRDVLAVMATGSGKSAIYQVPAVLIDG
ATLVVSPLIALQRDQISGLASTEAPEAVAINSQLGSHDIARNWQAVREHAAEYVFLAPEQ
LTNDDVLTALAQMDISLVVVDEAHCVSAWGHDFRPSYLRIADSIERFGGPPIVALTATAS
PVVRREIVEHLRLRDPLVIASGFDRPNIALEVSHYVADDDKRDAVLARMLAVERPALLYT
ATRKDTETYAAQLNSSGVTARAYHAGLSRAQRDEVHQLFRADNGVDVVVATSAFGMGIDK
ADVRTVVHASIPDSMDTYYQQIGRAGRDGKPATAALFYRPEDLGLARFFTTNRPDEELLA
GVYADLDRRAPKRWSDLRTRLGVRGPRVTNALNLLEEAELVCSTRDGFTRNSSVGVEEAV
HRAVEIVERNERIDRTRVEMMRGYAETRECRRQFLLGYFGEPLPEPCGNCDNCASGVVDD
EPPATDRWAVQTPVEHREWGSGVVMGAEDDRITVLFDEFGYRTLLLASIEHSGVLTRGDG
RTVGGF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgagtcggcggacggaactgcagcgggttgccaacgacatgttcgggtggccggagttg
cggcccgctcaactcgaggcgatggaggcggtgctcgccgggcgcgacgtgctggcggtg
atggcgaccggctccggcaagtcggctatctaccaggtgcccgccgtgctgatcgacggc
gcgacgctcgtcgtctcaccgctgatcgcactgcaacgcgaccagatcagcgggctggcg
tccactgaggcccccgaggcggtggccatcaactcccagctgggcagtcatgacatcgcg
cggaattggcaggcggttcgcgagcacgcagccgaatacgtgtttctcgcgcccgaacaa
ctcaccaacgatgacgtcctcaccgcgttggcccagatggacatttcattggtagtcgtc
gacgaagcgcactgtgtctcggcgtggggtcacgacttccggccgagctacctccggatc
gccgacagcatcgaaaggttcggcggcccgccgatcgtcgcgctgaccgccaccgcctcg
ccggtggtgcgccgcgagatcgtcgagcatctgcggttgcgcgatccgctggtgatcgcc
agcgggttcgaccggccaaacatcgccctcgaggtatcccactacgtcgccgacgacgac
aagcgcgatgcggtgctggccaggatgctggcggtagaacgcccagcactgctgtacacc
gcgacccgcaaggacacggaaacatatgccgcacaattgaattcgtccggcgtcactgct
cgcgcataccatgccggtctgtcgcgtgcgcaacgcgacgaggtccaccagctgttccgc
gccgacaacggtgtggacgtggtggtggcgacgtcggcgttcgggatgggcatcgacaag
gccgacgtacgcacggtcgtgcacgcctcgatcccggactccatggacacttactaccag
cagatcgggcgcgccggtcgcgacggaaaaccggcgacggcggcgctgttctaccgcccg
gaggatctgggcctggcccggttcttcaccaccaatcggcccgacgaggagctgctggca
ggtgtctatgcggatctggatcgccgggccccgaaacggtggagcgacttgcgtacccgg
ctcggagtgcgggggccgcgggtgaccaatgccctcaacctgctcgaggaggcggaactg
gtctgctcgacgcgggatggtttcacccgcaacagcagcgtcggagtcgaggaggcggtg
caccgcgctgtcgagatcgtcgagcgcaacgaacgcatcgaccgcactcgcgtcgagatg
atgcgcggatatgccgagacgcgggagtgtcgtcgccagttcctgcttggctatttcggg
gagccgctgcccgagccgtgcggcaattgcgacaactgtgcgtccggcgtcgtcgacgac
gagccgcccgccacggaccgctgggcggtgcagacgccggtcgagcatcgggagtggggg
tccggggtggtgatgggcgccgaggacgaccggatcaccgtcctgttcgacgaattcggc
tatcgcacactgctgctggcgtccatcgagcattccggggtgttgacccgcggtgacggc
cggacggtcggtggtttctag
DBGET
integrated database retrieval system
