Mycolicibacterium crocinum: MI149_22400
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Entry
MI149_22400 CDS
T08227
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mcro
Mycolicibacterium crocinum
Pathway
mcro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MI149_22400 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcro03021
]
MI149_22400 (rho)
03019 Messenger RNA biogenesis [BR:
mcro03019
]
MI149_22400 (rho)
Transcription machinery [BR:
mcro03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MI149_22400 (rho)
Messenger RNA biogenesis [BR:
mcro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MI149_22400 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
Fungal_virus_P2_C
NACHT
VWA_2
AAA_22
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
ULN44491
UniProt:
A0ABY3TSQ2
LinkDB
All DBs
Position
complement(4586683..4588530)
Genome browser
AA seq
615 aa
AA seq
DB search
MTAQSAPDSRPDTSSQAAPSGDAGPTGSLSTMVLPELRALANRVGVKGTSGMRKSDLIAA
IKEHQNGGNGGNGTAPRGDDTAEKAPAEQPAVKAPAEQPAEARESAAENNTENDAETNGG
EPRRRERRTATREAGATGSDNAEQPKSQDNRPEQGEKKSENRESAGGQQNQNRGDNQNQN
RGNNQNRDNDGDDDDRQGRRGRRFRDRRRRGERQGGEGGGGNDTELREDDVVQPVAGILD
VLDNYAFVRTSGYLAGPNDVYVSMNMVRKNGLRRGDAVTGAVRVPKEGEQNNQRQKFNPL
VRLDSVNGGPVEAAKNRPDFTKMTPLYPNQRLRLETTSERLTTRVIDLIMPIGKGQRALI
VSPPKAGKTTIMQDIANAITRNNPECHLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPP
SDHTQAAELAIERAKRLVEQGKDVVVLLDSITRLGRAYNNASPASGRILSGGVDSTALYP
PKRFLGAARNIEHGGSLTIIATAMVETGSTGDTVIFEEFKGTGNAELKLDRKIAERRVFP
AVDVNPSGTRKDELLLSPDEFAIVHKLRRVLSGLDSHQAIDLLMSQLRKTKNNYEFLVQV
SKTAPGGPAGNGDLD
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcacaatcggcgcctgattctcggccggacacctcctcgcaagccgctcccagt
ggggacgccggcccgaccggctcgctctccacgatggtcctgcccgagcttcgtgccctg
gccaaccgcgttggcgtcaagggaacctccggtatgcgcaagagcgatctgatcgccgcc
atcaaggagcaccagaacggcggcaatggcggcaatgggaccgccccccgcggcgacgac
acggccgagaaggcgcccgccgagcagccggccgtgaaggcgcccgccgagcaaccggcc
gaggcccgcgagagtgccgccgagaacaacaccgagaacgacgccgaaaccaatggtggt
gagccgcgccgccgcgagcgccggacggccacccgcgaggccggcgcgaccggttccgac
aacgctgagcagccgaaatctcaggacaaccgccccgagcagggcgagaagaagtccgag
aaccgcgagtccgccggcggccagcagaaccagaaccgtggcgacaaccagaaccagaat
cgcggcaacaaccagaaccgcgataacgacggcgacgacgacgaccgtcagggtcggcgc
ggccgccggttccgtgatcgtcggcgccgcggtgagcggcaaggcggcgagggcggcggc
ggcaacgacaccgaactgcgcgaggacgacgtcgtccagccggtcgccggcatcctcgac
gtgctggacaactacgcgttcgtccgcacctcgggctacctggccggccccaacgacgtc
tacgtctcgatgaacatggttcgcaagaacggcctgcgccgcggcgacgccgtcaccggc
gcggtccgcgtgccgaaggaaggcgagcagaacaaccagcggcagaagttcaacccgctg
gtgcgcctcgacagcgtcaacggcggcccggtcgaggcggccaagaaccgccccgacttc
accaagatgaccccgctgtacccgaaccagcggctgcgtttggagaccacctccgagcgg
ctgaccacccgcgtgatcgacctgatcatgccgatcggcaagggtcagcgtgccctgatc
gtgtcgccgcccaaggccggtaagaccacgatcatgcaggacatcgccaacgcgatcacc
cgcaacaaccccgagtgccacctgatggtggtcctcgtcgacgagcgtcctgaagaagtc
accgacatgcagcgctcggtcaagggtgaggtcatcgcctccaccttcgatcggccgccg
tcagaccacacccaggccgccgagctggccatcgagcgggccaagcgcctggtcgaacag
ggtaaggacgtcgtcgtcctgctcgactcgatcacccgcctgggtcgcgcctacaacaac
gcctcgccggcgtccgggcgcatcctgtccggtggtgtggactcgaccgctctgtacccg
ccgaagcggttcctgggcgcggcccgcaacatcgagcacggcggttcgctgacgatcatc
gcgacggccatggtggagaccggttcgaccggtgacaccgtgatcttcgaagagttcaag
ggcaccggcaacgccgagctcaagctcgaccgcaagatcgccgagcgccgggtgttcccc
gcggtcgacgtcaacccgtcgggcacccgcaaggacgagctgctgctcagcccggacgag
ttcgcgattgtgcacaagctgcgccgcgtgctgtccggcctggatagtcaccaggccatc
gacctgctgatgagccagctgcgcaagaccaagaacaactacgagttcctggttcaggtg
tccaagactgcgccgggtggcccggccggcaacggcgacctcgactag
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