Mycolicibacterium crocinum: MI149_24855
Help
Entry
MI149_24855 CDS
T08227
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
mcro
Mycolicibacterium crocinum
Pathway
mcro03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mcro00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MI149_24855
09124 Replication and repair
03420 Nucleotide excision repair
MI149_24855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcro03021
]
MI149_24855
03400 DNA repair and recombination proteins [BR:
mcro03400
]
MI149_24855
Enzymes [BR:
mcro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MI149_24855
Transcription machinery [BR:
mcro03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
MI149_24855
DNA repair and recombination proteins [BR:
mcro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
MI149_24855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
ULN40825
LinkDB
All DBs
Position
5095029..5096678
Genome browser
AA seq
549 aa
AA seq
DB search
MTEGPLIVQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHIHTYRITPLALWNARAAG
HDAEQVVDALVSFSRYAVPQPLLVDIVDTMARYGRLQLVKHPTQGLTLVSLDRAVLEEVL
RNKKISPMLGARIDDDTVIVHPSERGRVKQMLLKIGWPAEDLAGYVNGEAHPIDLEQDGW
ELRDYQQMAADSFWDGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNTVAGRQWKRE
LIARTSLTEEEIGEYSGERKEIRPVTIATYQVITRRTKGEYKHLELFDSRDWGLIIYDEV
HLLPAPVFRMTADLQSRRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAP
AECIEVRVTMTDNERMLYAVAEPDERYKLCSTAHSKIAVVKSILAKHPDEPTLVIGAYLD
QLDELGTELNAPVIQGSTKNAEREQLFDAFRSGEVKTLVVSKVANFSIDLPEASVAVQVS
GTFGSRQEEAQRLGRLLRPKHDGGGAVFYSVVSRDSLDAEYAAHRQRFLAEQGYGYVIKD
ADDLLGPAI
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagggtccgttgatcgtgcagtccgacaagacggtgctgctcgaagtcgaccac
gaacttgccggcgccgcgcgggcggcgatcgccccgttcgcggagctggaacgcgccccc
gagcacatccacacctatcgcatcaccccgctggcgttgtggaacgcccgcgccgccggc
cacgacgccgagcaggtggtcgatgcgctggtcagcttctcgcgctacgccgtgccgcag
ccgctgctggtcgacatcgtcgacaccatggcccgctatggccgcctgcagttggtcaag
catccgacacagggcctgacactggtcagtctcgaccgggcggtgctcgaagaggtgctg
cgcaacaagaagatcagcccgatgctgggcgcgcgcatcgacgacgacactgtgatcgtc
caccccagcgaacgcggccgggtcaagcagatgctgctgaagatcggctggccggccgag
gatctggccggctacgtcaacggcgaagcccacccaatcgacctcgagcaggacggctgg
gagctccgcgactatcagcagatggccgccgactcgttctgggatggcggctcgggcgtc
gtggtgctgccgtgcggtgcgggcaagacgttggtcggcgcggccgcgatggccaaggcc
ggggcgacgacgctgatcctggtcaccaacacggtggccggacggcagtggaagcgggag
ctgattgcccggacgtcgctgaccgaggaggagatcggcgaatactccggtgagcgcaag
gagattcgccccgtcaccatcgccacctatcaggtgatcacccggcgcaccaagggcgaa
tacaagcacctcgagctgttcgacagccgcgattggggcttgatcatctacgacgaggtg
cacctgctgcccgcgccggtgttccggatgacggccgatctgcagtcgcgccgtcggctg
gggctcaccgcgacgctgatccgcgaggacggccgcgagggcgacgtgttcagcctgatc
gggccgaagcggtacgacgccccgtggaaggacatcgaagctcagggctggatcgcaccg
gccgagtgcatcgaggttcgggtcacgatgaccgacaacgagcgcatgctgtacgcggtc
gccgaacccgacgagcgctacaagctctgctcgaccgcgcactcgaagatcgcggtggtg
aagtcgatcctcgccaaacatcccgacgagcccaccctggtgatcggcgcctacttggac
cagctcgacgagctcggcaccgagctgaatgcaccggtgatccagggctcgacgaagaac
gccgagcgcgagcagctgttcgacgcattccgcagtggtgaagtgaagacgctggtggtc
tccaaggtcgcgaacttctcgatcgatctgccggaagcgtcggtggccgttcaggtttcg
ggcacgttcggctcgcgccaggaggaggcccagcggttgggccggctgcttcgccccaag
cacgacggcggcggcgcggtgttctactccgtggtctcccgcgacagtctggacgccgag
tacgcggcgcaccggcagcggttcctcgccgaacagggctacggctatgtcatcaaggac
gccgacgacctgctcggccccgcaatctga
DBGET
integrated database retrieval system
