Mycolicibacterium crocinum: MI149_26790
Help
Entry
MI149_26790 CDS
T08227
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mcro
Mycolicibacterium crocinum
Brite
KEGG Orthology (KO) [BR:
mcro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcro03032
]
MI149_26790 (topA)
03400 DNA repair and recombination proteins [BR:
mcro03400
]
MI149_26790 (topA)
Enzymes [BR:
mcro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MI149_26790 (topA)
DNA replication proteins [BR:
mcro03032
]
Prokaryotic type
DNA Topoisomerases
MI149_26790 (topA)
DNA repair and recombination proteins [BR:
mcro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MI149_26790 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ULN41167
LinkDB
All DBs
Position
complement(5469621..5472413)
Genome browser
AA seq
930 aa
AA seq
DB search
MADDDRGSGNRNGNVRRLVIVESPTKARKIAGYLGSNYIVESSRGHIRDLPRNAADVPAK
YKTEPWARLGVNVEDNFEPLYIISPDKKSTVTELKGLLKDVDELYLATDGDREGEAIAWH
LLETLKPRVPVKRMVFHEITEPAIRAAAEHPRDLDTDLVDAQETRRILDRLYGYEVSPVL
WKKVAPKLSAGRVQSVATRIIVQRERDRMAFRSASYWDVIAELDASVSDPNAAPPRFTAR
LVNVDSKRVATGRDFDSLGVVRKPDEVVVLDEAAAGSLATGLRGSSLSVASVEEKPYTRK
PYPPFMTSTLQQEAGRKLRFSSERTMSIAQRLYENGYITYMRTDSTTLSESAINAARTQA
RQLYGDEYVHPSPRQYTRKVKNAQEAHEAIRPAGDTFATPGALHRELDNDEFRLYELIWQ
RTVASQMADARGTTLSLRINGTSSDGREVTFAASGRTITFAGFLKAYVETVDELAGGEAD
DAESRLPQLRQGQRVDATGLTADGHNTNPPARYTEASLIKALEDLGIGRPSTYSSIIKTI
QDRGYVHKKGSALVPSWVAFAVTGLLEQHFGRLVDYDFTAAMEDELDEIATGQERRTNWL
TNFYFGGDHGVADSIARAGGLKKLVGVNLEGIDAREVNSIKLFDDEEGRPIVVRVGKNGP
YLERMITGEDGEPKPQRANLNDEITPDELTLELAENLFATPQEGRVLGVDPESGHEIVAK
DGRYGPYVTEVLPPPPDDDPGVTAKKGKKPTGPKPRTGSLLRSMDLQTITLEDALKLLSL
PRVVGVDPANGEEITAQNGRYGPYLKRGTDSRSLATEDQIFEITLEEALKIYAEPKRRGR
QGAAAPPLRELGTDPASGQPMVIKDGRFGPYVTDGETNASLRKGDDVMSITDERASELLA
DRRARGPVKKKAAAKKTTRKAPAKKAAKKA
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
ttggctgacgacgaccgcggcagcggtaaccggaacggcaacgttcggcggctcgtcatc
gtcgagtcgcccaccaaggcgcgcaagatcgcgggttacctgggctccaattacatcgtc
gagtcgtcccgcggtcacatccgtgacctgccgcgcaacgccgccgacgtgcccgccaag
tacaaaacggagccgtgggcgcggctaggcgtcaacgtcgaggacaatttcgagccgctc
tacatcatcagcccggacaagaagagcacggtcaccgagctcaagggcctgctcaaggat
gtcgacgagctctacctcgccaccgacggtgaccgcgagggtgaggccatcgcctggcac
ctgctggagacgttgaagccccgcgtcccggtcaagcggatggtgttccacgagatcacc
gaacccgccatccgtgcggctgccgaacacccccgcgacctggacaccgacctggtcgat
gcgcaggagacccggcgcatcctggaccgcctctacggctacgaggtcagccccgtgctg
tggaagaaggtcgccccgaagctgtcggcgggccgggtgcagtccgtggccacccgcatc
atcgtgcagcgcgaacgcgaccggatggccttccgcagcgcctcgtactgggacgtgatc
gccgaactcgacgcgtccgtctcggatcccaacgccgcaccgccgcggttcaccgcgagg
ctggtcaacgtcgacagcaagcgggtcgccacgggccgtgacttcgactcgctgggcgtg
gtccgcaagcccgacgaagtagtggtgctcgacgaggccgctgccggctcgctggccacc
ggtttgcggggctccagcctgtccgtggcgtcggtggaggagaagccctacacccgcaag
ccgtatccgccgttcatgacgtccacgctgcagcaggaggcgggccgcaagctgcggttc
tcctcggagcgcacgatgagcatcgcgcagcggctgtacgagaacggctacatcacctac
atgcgtaccgactcgaccacgctgtcggagtcggccatcaacgccgcgcgcactcaggcc
cgtcagctctatggcgacgagtacgtgcacccttcgccacggcagtacacccgcaaggtc
aagaacgcccaggaggcgcacgaggccatccggcctgccggcgacaccttcgccaccccc
ggggcgctgcaccgcgaactcgacaacgacgagttccggctctacgagctgatctggcag
cgcaccgtcgcctcgcagatggccgacgcccgcggcacgacgctgagcctgcgcatcaac
ggaacctcttccgacggacgcgaagtcaccttcgctgccagcggtcgcacgatcaccttc
gccggcttcctcaaggcctacgtcgagaccgtcgacgagctggccggcggtgaagccgac
gacgccgagagccggttgccgcagctgcggcagggccagcgggtggacgccaccggcctg
accgccgacggccacaacaccaacccgccggcccgctacaccgaggcatcgctgatcaag
gcgctcgaggatctcggaatcggccgtccctcaacgtattcctcgatcatcaagacgatc
caggaccgcgggtacgtccacaagaagggcagcgcgctggtgccgtcctgggtggcgttc
gcggtgaccggtctgctcgaacagcacttcggccgcctggtggattacgacttcaccgct
gccatggaagacgagctcgacgagatcgccaccggccaggagcggcgcaccaactggctg
accaacttctacttcggtggcgatcacggggtggcggactcgatcgcccgcgccggtggc
ctcaagaagctggtgggtgtaaacctcgaaggcatcgatgcccgagaagtcaactccatc
aagctctttgacgacgaggaaggccggccgatcgtggtccgggtcggcaagaacggcccg
tacctggagcggatgatcaccggtgaggacggcgaacccaagccgcagcgcgccaacctc
aacgacgagatcacgcccgacgagctgaccctcgagctggccgaaaaccttttcgccaca
ccgcaagagggccgcgtgctcggcgtcgatccggagtccgggcacgagatcgtcgccaag
gacgggcgttacgggccgtacgtcaccgaggtgctgcccccgccgccggacgacgatccg
ggcgtcaccgccaagaagggcaagaagccgaccggccccaagccgcgcaccggttcactg
ctgcggtcgatggatctgcagaccatcacgctcgaggatgcgctcaagctgctctcgctc
cctcgcgtggtcggcgtggatcccgccaacggcgaggagatcaccgcgcagaatggccgc
tacggcccatacctcaagcgcggcaccgactctcgttcgctggccaccgaggaccagatc
ttcgagatcaccctcgaagaggcgttgaagatctatgccgagcccaaacgtcgtggccgc
caaggcgctgcggctccgccactgcgcgaactgggcacggatccggcgtcgggccagccg
atggtgatcaaggacggccgcttcggtccgtacgtcaccgacggcgagaccaacgcgagc
ctgcgcaagggcgacgacgtcatgagcatcaccgacgagcgggcctcggagctgctcgcc
gaccggcgtgcccgcggtccggtgaagaagaaggccgccgcgaaaaagacgacgcgcaag
gcgccggccaagaaggccgcaaagaaggcgtaa
DBGET
integrated database retrieval system
