Moraxella catarrhalis 25240: DR90_329
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Entry
DR90_329 CDS
T03217
Name
(GenBank) ribonuclease, Rne/Rng family domain protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mcs
Moraxella catarrhalis 25240
Pathway
mcs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DR90_329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcs03019
]
DR90_329
03009 Ribosome biogenesis [BR:
mcs03009
]
DR90_329
Enzymes [BR:
mcs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
DR90_329
Messenger RNA biogenesis [BR:
mcs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DR90_329
Ribosome biogenesis [BR:
mcs03009
]
Prokaryotic type
rRNA processing factors
DR90_329
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
AIK01153
LinkDB
All DBs
Position
complement(364304..367798)
Genome browser
AA seq
1164 aa
AA seq
DB search
MKRILINATHSEEIRVALCKDNHLYDFDLENRTREQKKANIYKGHITRVEPSLEAAFVEY
GSARQGFLPLREIAPEYLNGNTHEDSIKQLIKEGDEIIVQVEKEERGNKGAALSSFISLA
GRYLVLMPNNPKAGGISRQISGKVREEMKQIIAGLNLPKNMSVIVRTAGLGKGADDLQND
LDHLLDIWKSIQEQNKKRPSPCLVHQEAGVVTRAVRDYLRDDIGEVWIDSENAYDEAANF
IKAVMPTQLSKLRKYTDYEPMFARFGIERQIETAYQREVRLPSGGSIVIDQTEALVAIDI
NSSKSTKGSDVAETAYHTNLEAADEIARQLRLRDMGGLIVIDFIDMNDPRHQKDVEKRLI
EATRHDRARVQFSEISKFGLMQMSRQRLRPSLEESTGYICPRCHGNGMIRDLRSLSLSIM
RQIEQIALKERMGEIQAEVPTDIAAFLLNEKRESLVYLEQDSGARITILPHAHLESPNFS
LHFNPDGFAPSSYERIADTEEKENIDRGYEVNWQTDHEKSDSNRWQKSDNKPIKKNTTDS
EPKPTKPEPQAVAWLSNLFAPKPQAKVAGSLGTADAALAIEALVNGGAVSLGAAGRMANI
QAPSAEPTPRPQAEDKRHKKSRNAKKESGEETAAQAQPSEKTDKKTKKERDKEQYPKREA
GSRRESRGEIVRGETLHKTEEKAEKADKADKPIRADKPKSEKTEKLPHQKAANPKEVVLH
VSSIKAAENNTQVIHLSLDGSKSTKPTKDETSSAKDDAKIAPKANSNQAIKAPKEPIPTK
PKHEAEPITQSDESGEMSALHTVSATTGVEPKLAEKIQTLAKSMNKATNDPRVVQIALQQ
TQAINLNAITAGALILRVLGKSATGNFVNDFITAMTKMSTPAQFDFANFGYSPLDTATKN
EFGKLTQATAQASAPQGRTEAIPRPITRRAANDPRGQHPEYIEATSPNNDQVSKTIAQHS
NQASPDTFDHAVTPADTKHKESKTATDSSSDSDNSQLSKADDAVEHQTNDAIDATTLAAE
QISDSIGDTVSKTMADISTVVSEAADDTAKMADLDTHNQVKPESGKDKKVSQIKEITADQ
KTERKTKANSYKDMIENVAGQLQPQVGILNLMATKPAKVSKPAKTRAPRKPSKKPTKVEV
RKLSKPVEPSESSPAKSADDSANN
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcatcttaattaacgccacacatagtgaagaaattcgtgttgcactgtgcaaa
gataaccatttatacgactttgacctagaaaatcgtactcgtgaacaaaaaaaagccaat
atttataagggtcatatcactcgtgtagagccttctttggaagctgcatttgttgaatat
ggctcagcacgccaaggttttttaccactccgagaaatcgcccctgaatacctaaacggc
aatactcatgaagacagcattaagcagctcatcaaagaaggtgatgaaatcatcgtccaa
gttgaaaaagaagagcgtggcaataaaggcgctgccttatccagctttatttcactggcg
ggcagatatttggtcttgatgccaaacaaccccaaagcaggtggcatcagccgtcaaatc
tcaggtaaagtccgtgaagaaatgaaacaaatcatcgcagggctaaacctaccaaaaaat
atgagcgtgattgttcgcacagcagggcttggtaaaggggctgatgatttacaaaatgac
cttgaccatcttttagatatttggaaatccatccaagaacaaaataaaaaacgcccaagc
ccttgcttggtacatcaagaagcgggcgtggtaactcgtgcggtccgtgactatttgcgt
gatgacattggcgaggtttggattgacagtgaaaatgcttatgatgaagctgccaatttc
atcaaagctgtcatgccgacccagcttagcaaactgcgtaaatacaccgattatgagcca
atgtttgcccgttttggtattgagcgtcaaatcgaaaccgcctatcagcgtgaagtacgc
ttaccttctggtggttctattgtcattgaccaaactgaagctttggttgctattgatatc
aattcatcaaaatccaccaagggctcagatgtcgccgaaaccgcctatcataccaattta
gaagctgccgatgagattgctcgccagttgcgtttgcgtgatatgggtggtttgatcgtc
attgattttattgatatgaacgacccacgccaccaaaaagatgtcgaaaaacgcctcatc
gaagcaacacgccatgaccgtgcccgtgttcagttttctgagattagtaaatttggactg
atgcagatgagccgacaacgcttgcgtccttctcttgaggaatctacaggctatatttgc
cctcggtgccacggtaatggcatgattcgagatttgcgttctttatcgctatctatcatg
cgacaaattgaacaaattgctctcaaagaacgcatgggcgaaattcaagctgaagtccca
accgacattgcggcatttttattaaatgaaaaacgagaaagtttggtttatttagagcaa
gacagcggtgcacgaatcaccattttaccacatgcacatcttgaaagcccaaattttagc
ctacactttaatcctgatggatttgctccgtcaagctatgaacgcattgctgacaccgaa
gaaaaagaaaatatcgaccgtggttatgaggtgaattggcaaacagaccacgaaaaatca
gactcaaaccgttggcaaaaatctgacaataagcccatcaaaaaaaatacgaccgattca
gaacccaagccaaccaaaccagaacctcaagcggttgcatggttgtcaaacttatttgca
ccaaaaccacaagcgaaagttgctggcagtttaggtacagcagatgccgctttagcgatt
gaagcactggtaaatggcggtgcggtaagcctaggtgcagcaggccgtatggcaaatatc
caagcaccatcagctgagccaaccccacgcccccaagcagaagataaacgccacaaaaaa
tctcgaaatgccaaaaaagaatctggcgaagagaccgccgcccaagcccaaccctctgaa
aagacagacaaaaaaaccaaaaaagaacgcgacaaagaacagtatccaaagcgtgaagca
ggctctcgccgagaatctcgtggtgagattgtgcgtggtgagacacttcataaaaccgaa
gaaaaagcagaaaaagcggataaagctgataagcccattcgtgccgataagcccaaatct
gaaaaaaccgaaaagctaccacatcaaaaagcggccaatcctaaagaagtggtgctacat
gtgagcagcattaaagcggctgaaaataatacgcaagtcatccatctttcattggatggc
agtaagtctacaaaaccaacaaaagacgaaacatcaagtgccaaagatgatgccaaaatt
gcacctaaagcaaattccaatcaggcaataaaagcaccaaaagagccgatacctaccaaa
cccaagcacgaagctgagccgatcacacaatcagatgaatcaggtgagatgagtgcatta
catacggtctctgctacgacaggggttgagcccaaactggctgaaaaaattcagacactt
gccaaatctatgaataaggctaccaacgaccctagagtggtacaaatcgcccttcagcag
acacaggctatcaatctcaatgcaataacagcaggggcgctcatcttgcgtgtcttaggt
aaatcggcgacaggtaattttgtgaatgattttatcactgcaatgacaaaaatgtccacg
cctgcacagtttgattttgccaactttggttattcaccgctggatacagccacaaaaaat
gagtttggtaaactaactcaagcgaccgctcaagcatcagcgccacagggcagaaccgag
gctataccacgcccaatcacacgccgtgctgccaatgaccctcgtggtcagcatcctgag
tatattgaagcaaccagccctaacaatgatcaggtcagcaaaacaattgctcagcattct
aatcaagccagtcctgatacttttgatcatgctgtcacaccagccgacaccaagcataag
gaatcaaagacagcgaccgattcttcatccgactcagataacagccaacttagcaaagct
gatgatgcggttgaacatcaaaccaatgatgccattgatgctacaacgctggctgcagag
caaatctctgacagcattggcgacaccgtcagtaagacaatggctgatatctcaaccgtc
gtatcagaagcggctgatgatactgctaaaatggcagatttggatactcataaccaagtg
aaacctgaaagtggtaaagacaaaaaagtcagccaaatcaaagagatcaccgctgaccaa
aaaaccgaacgcaagaccaaggcaaatagctataaagatatgattgaaaatgtcgcaggt
cagctacaacctcaggttggtattttaaatctgatggcaactaaacctgccaaagtgtcc
aaaccagccaaaacaagagcacctagaaagccaagcaaaaaaccaaccaaggtagaagtg
cgtaagttatctaagcctgtggagccttctgagtcttctcctgctaaatcagcagatgat
tcagccaacaattaa
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