Moraxella catarrhalis BBH18: MCR_0995
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Entry
MCR_0995 CDS
T01224
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
mct
Moraxella catarrhalis BBH18
Pathway
mct03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mct00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MCR_0995 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mct03019
]
MCR_0995 (rhlB)
Enzymes [BR:
mct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MCR_0995 (rhlB)
Messenger RNA biogenesis [BR:
mct03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MCR_0995 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
NTF-like
ERCC3_RAD25_C
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ADG61260
LinkDB
All DBs
Position
complement(993704..994879)
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AA seq
391 aa
AA seq
DB search
MTETTVKNFDDLPLSEPILKAVQALKFDQLTPIQAQILPHTLANQDAIGQAQTGTGKTAT
FLITIIESLLKRPFQADEIRYLGEPRALVLAPTRELAQQILADCRELTRFSQLYNLCITG
GSDFDKQLEQLHKRPLDILIGTPGRIIDWVNKGELFLDRVEVFVLDEADRMLDMGFIPDI
KRIVRHMPSNTERQSLLFSATFNQDVMNLAYRWLHQPAFVEIAPESKTNQAIDQQFYLVT
EREKTSALKQILADDSVKKTIIFANRKDQVKRLYDYLRRHHKVTMLSGDVAQQKRERYLQ
RFKDGEVNVLVATDVAGRGIHVDDVTHVINYTLPDMPDDYVHRIGRTGRAGLSGVSISFV
SENDAFNLPALERHIDQKFKLNQFEFLDEHK
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaacgactgttaaaaattttgatgatttaccactatccgagccaattttaaag
gcggtgcaagcattaaaatttgatcaattaacccccattcaagcacagattttgccacat
acattggcaaatcaagatgccattggacaggcacaaacaggcacaggcaagacagcgaca
tttttgattaccatcattgagtcgctgttaaagcgtccgtttcaagctgatgaaattcgc
tatcttggcgaacctagagcattggttttggcacctaccagagagcttgcacagcagatt
ttggcagattgccgtgaactgacccgatttagccagctttataatttgtgtattacaggc
ggctctgattttgataaacaacttgagcagttgcataaaagaccgctggatattttgatt
ggcacaccggggcgtatcatcgattgggttaataaaggcgagctttttttggatcgtgtt
gaggtattcgtgcttgatgaagctgatcgtatgctggatatgggttttatccctgatatc
aagcgtattgtcagacatatgccaagcaataccgaacgccaaagcctattattttcggca
acttttaatcaagatgtgatgaatctggcttatcgttggctacatcagccagcatttgtt
gagattgcacctgaaagtaaaaccaatcaggcgattgatcaacaattttatttggtcact
gagcgtgaaaaaacgagcgcacttaagcaaattttggcagatgattcggtgaaaaaaacg
atcatttttgccaatcgcaaagatcaagttaaacgcctatacgattatttgcgtcgtcat
cacaaggttacgatgctgtctggagatgtggctcagcaaaaacgagagcgttacttgcag
cgttttaaagatggtgaggtcaatgtactggtagcaaccgatgtggcagggcgtggcatt
catgtggatgatgtgacgcatgtgatcaattatactttacctgatatgcccgatgactat
gtgcatcgtatcggtcgtacagggcgagcgggtttgagtggtgtgtccatcagttttgtt
agtgaaaatgatgcctttaacttgcctgcacttgaacggcatattgatcaaaaattcaaa
ctcaatcaatttgagtttttagatgagcataaatag
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