Moraxella catarrhalis BBH18: MCR_1561
Help
Entry
MCR_1561 CDS
T01224
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mct
Moraxella catarrhalis BBH18
Pathway
mct03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mct00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MCR_1561 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mct03021
]
MCR_1561 (rpoA)
03400 DNA repair and recombination proteins [BR:
mct03400
]
MCR_1561 (rpoA)
Enzymes [BR:
mct01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MCR_1561 (rpoA)
Transcription machinery [BR:
mct03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MCR_1561 (rpoA)
DNA repair and recombination proteins [BR:
mct03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MCR_1561 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
DUF7219
DUF22
Motif
Other DBs
NCBI-ProteinID:
ADG61818
LinkDB
All DBs
Position
complement(1547513..1548517)
Genome browser
AA seq
334 aa
AA seq
DB search
MTNATEFLTPSAINVDTVNETTAKVTLEPLERGFGHTLGNALRRILLSSLSGAAVVEAEI
EGVDHEYSTLEGLQEDVLDLLLNLKSLAIILHDQNEAYLTLDKQGAGVVTAADLELPHNV
EIANPDLVLGTLSERGHLKMRLHVVTGRGYEPANQRREDANSKIIGRLKLDASFSPIIRV
AYDVENARVEQRTDLDKLIIELETNGTIDPEEAIRKAATILQQQIAIFVDLEAEEAPEPI
KEKEEIDPVLLRPVDDLELTVRSANCLKAENIYYIGDLVQRSETELLKTPNLGKKSLTEI
KDVLASKNLELGMRLDNWPPSDLRVDDRFSYRSR
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatgcaactgagtttctaacaccgagtgcgattaatgtcgatacggtcaatgaa
acgactgcaaaggtcacgctcgagccgttagagcgcggttttgggcatacgctaggtaat
gctctacgccgtattctactttcttcgttatcaggtgctgcagtagtagaagctgagatt
gaaggtgttgatcatgaatattcaacactagaagggttgcaagaagatgtactcgatctt
cttttaaatctgaagtctttagcgattattctgcatgaccagaatgaagcatatttgact
ttggataaacagggtgcaggagttgtaactgctgctgatcttgagctaccacacaatgtt
gaaatcgccaatcctgatttggtacttggtacattgagtgagcgtggtcatctgaagatg
cgcctacatgtagtgacaggtcgtggctatgagcctgccaatcagcgtcgtgaagatgcc
aattctaaaattattggtcgcctaaagcttgatgcaagctttagcccaattatcagagtg
gcttatgatgttgaaaatgctcgtgttgaacagcgtaccgatcttgataaactgattatc
gagcttgagaccaacggcacgattgacccagaagaagctattcgcaaagctgcaacgatt
ctacaacagcaaattgctatttttgtggatcttgaagctgaagaagcgcctgagcctatc
aaagaaaaagaagagattgatcctgtgctgttacgcccagtagatgatcttgagttaacg
gttcgttcggcaaattgcttgaaagctgaaaatatttattacatcggtgatttggtacag
cgttcagaaactgaactattgaagacaccaaatcttggtaagaaatcattgactgagatt
aaagatgtgcttgcatctaaaaatcttgaacttggtatgcgtttagataactggccgcca
agtgatttgcgtgtcgatgatcgtttttcttatcgtagccgctaa
DBGET
integrated database retrieval system
