Mobiluncus curtisii: HMPREF0573_10153
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Entry
HMPREF0573_10153 CDS
T01257
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mcu
Mobiluncus curtisii
Pathway
mcu03420
Nucleotide excision repair
mcu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HMPREF0573_10153
03430 Mismatch repair
HMPREF0573_10153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcu03400
]
HMPREF0573_10153
Enzymes [BR:
mcu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HMPREF0573_10153
DNA repair and recombination proteins [BR:
mcu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HMPREF0573_10153
MMR (mismatch excision repair)
Other MMR factors
HMPREF0573_10153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
AAA_30
UvrD_C_2
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ADI66472
UniProt:
D6ZIC3
LinkDB
All DBs
Position
complement(175918..179493)
Genome browser
AA seq
1191 aa
AA seq
DB search
MTTTKPVTEIFTASELAILTGANPPTQEQSAVITAPRGQLLVVAGAGSGKTETIANRLVY
WVVNAGIVPEAILGLTFTRKAAAEMAARFSLRLDRFASLLESVQERRQTAEVTAVLKAAD
FDLNQLRQRFDTLVQRGMTPEMLRHPVSVSTYDSYAGTLLTEFGTLVGRESGFTTITDAA
RYQIMTDVVQSWTGALGTKREGENAENLVNILLSLANDTNSHLVDLAEMKQTYRSYHAAA
RRLQDTEGADLNSTALRNLDTIIDTMEFGCNATNIIQAFNERKRELLMADFSDQTRETVR
LVEQLPAVGESQRERFQLVFLDEFQDTSVAQMRFLAGIFRDCAVTAVGDPNQAIYGWRGA
SAASMEDFGSIFCTDSHQLLTRTLSTSWRNDAVILAVSNRISAELTGAPAVAAERNIPLN
QDVQSAISKPLQARSGANPGIVYGIQTLTDLQQSQAVVNFFRLWQAQRVKLQGEGVPAEK
LPTAAVLCRAKNAIPGLVESLRQAGIPYQTRGMQGILEDPGVRLVRAALEITDNPEKSAS
LLLLLDRYRLGLSDLQAVGRNRHRFTPYQIVMEGGAQVSTEAQARLEKLRGILTELKDNA
PFATPLVLARLAHRLLDLDIEQQLPGSSCQAGAYVEFLNLVRDFGRTPGATLSGFLNWLS
AGEDEEASFADLDFEVDNAAVQIITMHAAKGLEWDWVAVPNLNKSTFPSVRGEIWVTQRD
VLPYPLRSDRDHLPELELKTQTLLTATGRVSKKKGLLETFKEDAEHYALREESRLAYVAF
TRAKSRLLLGHCWFERQTKKGRPPSQFFLVEQDPQQHIFSDADSLASSGGANIIQSDSST
VSVVESSEGGAVGAANLLTPFNAETFAQEVARLGIETPDVDWPDTIVTSIPDKIENPNQD
RFDAGIWPALPLIQTRPDFAQAVQATEAALDSGKFSGGISQDADEEAERRLSQLLHQPQT
RLGTGDLLGRISATGMAHLAQDSEGYLLQRLRPLPQQPSVAARLGTYMHAWIASQLENED
TFIFDAGTEDGFTPEQRELLHKWQQRYEDLELLRRLRGPQVEFDGELYLEEAGGAVIPLR
IDAQFEEAQTGKIWIIDWKTGRRPTPENYAQWLHQLGIYRLYWLQEHPETPAEDIICAYI
FLNEDNPAKQLLTLQDILDELGIAEYSRNLLVSNLTDRGEEIDAVLEKFGY
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgactacgacgaaaccagtgacagaaatatttaccgcgtccgaactggctattttgacg
ggagctaatccgccaactcaggaacaatccgcagtaattacggcgccacgaggacagctc
ctggtggtagccggggcaggcagtggcaagacagaaaccattgcgaaccggctggtttat
tgggtcgtcaatgccggtattgtccccgaagcaattttgggactgaccttcactcgtaag
gccgcggcagagatggcagctcgtttttcgttgcgtttggatcgcttcgcgagtctttta
gagtcggtgcaagaacgacggcaaaccgcggaggttaccgcggtgttaaaagccgcggac
tttgatttgaatcagctgcgccagcgtttcgatactcttgtccagcggggaatgactccg
gaaatgctgcgtcacccggttagcgtctccacctatgattcctacgcgggaaccctcttg
acagaatttggcacgttagtcggacgggaatccggtttcaccaccatcacggatgccgcc
aggtatcaaatcatgactgacgtggtgcaaagctggaccggggcgttagggacaaaacgt
gagggggaaaacgctgaaaacctggtaaacattctgctgtctctggctaacgacacgaat
tctcatctcgttgatttggctgagatgaaacagacctatcgttcctaccacgcagctgcc
agacgcttgcaagataccgaaggtgccgaccttaacagcacggcgttacgtaatttggat
accatcatcgacactatggaattcggatgtaacgctactaacatcatccaggctttcaac
gaacgtaaacgggaactcctgatggcagatttttctgaccaaactcgagaaacggttcgt
ttggtggaacaactgccggcagtcggggaaagtcagcgggaacgattccagctggtgttc
ttggacgaattccaagacacctcggtggcgcagatgcgtttcctggcaggaattttccgc
gattgtgcggttactgcagtgggagatccgaaccaagccatttacggttggcggggggct
tcggcagcctcaatggaggacttcggttcgatattttgcacggattctcaccagttactc
actcggaccttgtcgacttcatggcgtaacgacgccgtcatcctcgcagtctcgaaccga
atttctgcggaattgacaggggcgccggcagtggctgcggagaggaacatacccctgaat
caggacgtccagtcggcaatcagtaaacccctgcaagcccgatcgggggcaaatcccggc
atcgtctacggaatccagacgttgactgatttgcagcaaagtcaagcggtggtgaacttt
ttccggttgtggcaagctcagcgggtgaagctgcagggggaaggtgtgcctgccgaaaaa
ttacctaccgccgcagtactgtgccgtgcgaaaaatgctattcctggcttggttgagtcc
ctgcgccaagccggaatcccttaccagaccaggggtatgcagggaatcttggaagatccg
ggagtgcgcctggtgcgcgccgctctggagatcactgacaatcccgagaaaagcgccagc
ctgttgcttttgcttgatagatataggttgggattgagcgatttgcaggcagtgggacgg
aatcggcaccgttttaccccctaccagatagtaatggagggcggggcgcaagtttcaact
gaagctcaagctcgactggaaaaactacgcggaatcctgacggagctaaaggataatgcc
ccatttgcgacccccctggtgctggcacggttagcacatcgactgctcgatttagatatt
gaacagcagttacccggttcctcctgccaagctggggcctatgtggagttcttaaaccta
gttcgtgattttggacggactcccggagcgacgctgagcggatttcttaactggctcagt
gccggtgaagacgaagaagccagctttgctgacctagacttcgaggtggacaatgcggcg
gtgcagattatcaccatgcacgccgcgaaggggctcgaatgggattgggtggcagttcca
aacctaaacaagagcacttttccttctgtcagaggtgaaatctgggtaacgcaacgtgat
gtgttaccctacccgctgcgcagtgatcgggatcatcttccggagttggaactgaaaacc
cagaccctgctgactgcgaccggaagagtgtcaaagaaaaaagggttactcgaaacgttt
aaggaagatgctgagcattacgcactccgggaagaatcacggttggcatatgtggctttc
actcgcgccaagtcccggctcctgttgggacactgctggttcgaacggcagaccaagaaa
ggacgtccacccagccaatttttcctggtagaacaagacccgcaacagcacatcttttca
gatgctgattcattggcgtcatcgggcggggcaaacattatccaatcagactcatctacg
gtgtcagttgtggaatcctcggaggggggtgcggtcggcgccgcaaacctgttgactccg
tttaacgcggagacatttgcgcaggaagtcgcccgattggggattgagactcccgacgtg
gactggcctgacaccatagttacgtccattcccgacaaaattgaaaatccaaaccaagac
cggtttgacgctggcatttggccggcgctacctctcattcagacgcgcccagactttgct
caggcggtgcaagccactgaggctgctttggatagtggcaaattctctggtggaatcagt
caggacgcggatgaagaagctgagcgccgcttgagccaactgctgcatcagccacaaacg
cgcttgggcaccggtgatttgttgggacgaatttctgctaccgggatggcacatttggcg
caagacagcgagggatacttgctccagcgtctgcgtcccctgccccaacagcccagtgtg
gcggcacgtttgggaacctacatgcacgcttggattgccagccagctagaaaatgaagat
actttcattttcgacgccggaacggaagacggcttcacgccagaacagcgtgaactgctg
cacaaatggcagcagcgttacgaagatttagaactactacggcgactgcgtggtccacag
gtcgaatttgacggtgaactctaccttgaggaagccggcggtgccgtgattccattgcgg
atagatgcgcagtttgaagaggcgcaaaccggaaaaatctggattattgactggaaaacc
ggtcgacgtccgactccggaaaactacgctcagtggctgcaccagctgggaatttatcgg
ctttactggttacaggagcatcccgaaactccggcggaagatattatctgcgcctacata
ttcctcaatgaggacaatccggcgaaacaactgctcaccctgcaagacatccttgatgaa
ctgggcatagccgaatacagtcggaacctcttggtgagtaacctgacagaccggggagag
gagattgacgcagttttagaaaaatttggatattga
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