Mobiluncus curtisii: HMPREF0573_11794
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Entry
HMPREF0573_11794 CDS
T01257
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
mcu
Mobiluncus curtisii
Pathway
mcu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mcu00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HMPREF0573_11794 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcu03021
]
HMPREF0573_11794 (rpoD)
Transcription machinery [BR:
mcu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HMPREF0573_11794 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
ADI68113
UniProt:
D6ZHK5
LinkDB
All DBs
Position
complement(2020758..2022449)
Genome browser
AA seq
563 aa
AA seq
DB search
MSTSEKSLENQGETSPTTTRKTAGKAAGAKAGSTTRKASTKAGQKVSKAQSEAKSTAKSA
TKSKASTGSKSAAAKATKTAAKSGGKASTKTGAKTAGKTAAKSTTKTRAKSSAKSGEKTT
TRKTRTSKAKATETSTGTKRRKSATNQELPEESVKSPELEVEDEIEEEVEDKDNEPDEGE
LEDPEIEDLADLEGDDEEDDADSEEDAEDTEDDEDEDASHEDKSKDTKLGSKAKSSTSAE
YTLSEKDDADEPAQKVTVAGATSDPVKDYLKQIGKVALLNAEQEVDLSKRIEAGLYAEHL
LKTKQETMTPKQIRELHYVVQDGQMAKNHLLEANLRLVVALAKKYTGRGMLFLDLIQEGN
LGLIRAVEKFDYSKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQ
MLQDLGREPTPDELAQELEMTPEKVVEVQKYGREPISLHTPLGEDGDSEFGDLIEDSEAV
VPADAVSFMMLQEQLQRVLDTLSERESGVIAMRFGLKDGQPKTLDEIGRRYGVTRERIRQ
IEAKTMSKLRHPARSQSLRDYLN
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
gtgtctaccagcgaaaagtcccttgaaaatcaaggcgaaaccagccctactaccactcgg
aagactgccggcaaggcagcaggcgccaaagctggttccaccactcggaaagctagcacc
aaggcgggacagaaagtctctaaggcgcagtcggaggcgaaatcaaccgccaaatctgca
acgaaatctaaggcatcgaccggatccaagagcgccgcagcgaaggctaccaagaccgct
gctaaatctggcgggaaagctagcacaaagactggcgctaaaactgcagggaaaaccgcg
gcgaaatccaccaccaagaccagagcaaaatccagtgccaaatcaggtgaaaagaccacc
actcggaaaacccggacctccaaggcaaaagccacggagacgagcacgggtacgaagcgg
aggaagtctgcaaccaatcaagaactacctgaagagtctgtaaaatctccggaactcgaa
gtcgaggacgaaatcgaggaagaagtcgaagataaggacaacgaacctgatgaaggcgag
ctggaagacccggaaatcgaggatttagcagacctcgagggcgacgacgaagaagatgat
gcagacagtgaggaagacgctgaggatactgaggacgacgaggacgaggacgcttcccac
gaggataaatcgaaagataccaaactagggtctaaagctaaatcctcgaccagtgcggaa
tataccctctccgaaaaagatgatgcggacgagccggctcaaaaggtgaccgtagctggg
gcgacttccgatccggtcaaggattacctgaagcaaatcggcaaggtcgcgctgttgaac
gcggaacaggaagtggacctgtccaagcgcatcgaagctggtctgtacgcggagcacctg
ttgaagactaagcaggaaaccatgactccgaaacagattcgggaactgcactatgtcgtt
caagacgggcagatggcaaagaatcacctgctagaggcaaacctgcgcttggtagtggct
ctggcaaagaaatataccggacgtggtatgttgttccttgacttgattcaagagggcaac
ttaggtctgatacgtgcggtagaaaaattcgattattccaaaggttacaagttctctacc
tacgccacctggtggattcgtcaggccatcacccgtgctatggcagaccaggcgcgtacc
atccggattccggtacacatggtggaagtcattaataaactggcgcgggtgcaacgccaa
atgctgcaggatctgggacgcgaacccacccctgatgagctggcgcaagaacttgaaatg
accccagaaaaggtcgtggaagtccagaaatacggtcgcgagccgatttccctgcacacc
ccgctgggtgaggacggtgactctgaattcggggatttgattgaagactccgaagcagta
gtgcctgccgatgccgttagctttatgatgctccaagaacagctacaacgtgttttggac
acgttgagcgaacgagaatctggcgtgattgccatgcgtttcggtctcaaggatggtcaa
cccaagactctggacgaaatcgggcgccgctacggggtcacccgcgagcgtatccgccag
attgaggccaagacaatgtccaagctgcgtcacccggctcgttctcagtctttgcgcgat
tacttgaactaa
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