Methanobacterium congolense: MCBB_0253
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Entry
MCBB_0253 CDS
T04503
Symbol
rpoB1
Name
(GenBank) DNA-directed RNA polymerase subunit B'
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
mcub
Methanobacterium congolense
Pathway
mcub03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mcub00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MCBB_0253 (rpoB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcub03021
]
MCBB_0253 (rpoB1)
Enzymes [BR:
mcub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MCBB_0253 (rpoB1)
Transcription machinery [BR:
mcub03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MCBB_0253 (rpoB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Zf_2nd_IFT121
DUF5817
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
SCG84836
UniProt:
A0A1D3KZX3
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All DBs
Position
I:268852..270663
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AA seq
603 aa
AA seq
DB search
MKKSKIYINGKLIGTCDDPEDFVETMRQKRRSGEVSHEMNITYYPETDEIYIFTDPGRTR
RPLIVVEGGESKLKQEHIQKLEDGELDWNDLIDNGIIEYIDAEEEENAYIAMFEDDITEN
HTHLEIDPSTMLGICAGIIPFANHNSSPRNTMEAGMTKQALGLYVSNYGMRTDTRAHLLH
QPQVPMVKTRSIDATKYDKRPSGQNFVVAVMSYEGYNMEDALILNKASLERGLARSSFFR
SYEASERRYPGGQEDKFELPESVVRGYRNEELYKHLDENGIVNPEVEVKSGDVLIGKTSP
PRFLEELDEFGTSRERRRETSVTVRHGEHGIVDAVLLTETVEGSKLAKIRVRDQRQPEFG
DKFASRHGQKGVVGLIVSQENMPFTENGIVPDLIVNPHAIPSRMSVGQVIEMLAGKSGAM
EGTRMDGTPFTGMEEYEIMELLKKNGFETSGREALYNGITGERIEAEVFIGVAFYQKLHH
MTSDKVYARSRGPVQVLTRQPTEGRAREGGLRFGEMERDCLIAHGAALALKERLLDESDK
YEAIVCANCGMIAIYDKIRDKTYCSLCGESETFPVEISYAFKLLLDELKSLCIFPKLVME
DKA
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaatccaagatatatattaatggtaaactcataggaacctgtgatgacccagaa
gactttgttgaaaccatgaggcagaaacgaaggtctggagaggtttcacatgagatgaac
ataacctactaccctgaaacagatgagatatacatattcacagatccaggacggacaaga
agacctctcatcgttgttgaaggcggtgagtcaaaactcaaacaggaacacatccagaag
cttgaagatggtgaactggactggaacgatctcatagacaatggaataattgagtacatt
gacgctgaggaagaagaaaatgcatacatagccatgtttgaggatgacattacagagaat
cacactcacctggaaatagatccttcaaccatgctgggaatatgtgccggtatcatacca
tttgcaaaccacaactcttctccacgtaacacgatggaagcaggtatgacaaaacaggct
ctaggtctttacgtatcaaactacggcatgagaactgacacccgtgcacacctcctgcac
caaccacaggtgccaatggttaaaacaagaagtatagatgctaccaagtatgataaaagg
ccatcaggacagaacttcgttgtggctgttatgtcctacgaaggatacaacatggaagat
gcactcatcctgaacaaggcatcacttgaaaggggacttgcaaggtcatcatttttcaga
tcctacgaagcatctgagagacgttaccctggaggacaggaggataaatttgaactacct
gaaagtgttgtaagaggttaccgtaacgaggaactttacaaacacctcgatgaaaatgga
attgtaaatcctgaggtagaggtaaaatcaggtgatgttctcattggaaaaacatcacct
ccaaggttccttgaagaactggatgaatttggaacctcaagggaacgccgaagggaaaca
tccgtgactgtgagacacggtgaacacggtatcgttgatgcagtactgctcacagagaca
gttgaaggaagtaaacttgcaaaaataagggtaagagaccaaagacagcctgaatttggt
gataaatttgcatcaaggcacggtcagaaaggtgttgttggtttaatagtttcacaggaa
aacatgcccttcacagaaaatggaatagtccctgatctgatagtgaacccccacgctata
ccttcaaggatgtctgttggacaggttattgagatgcttgcaggtaaatccggagccatg
gaaggaacaagaatggacggtacaccattcactggaatggaagaatatgaaataatggaa
ctcctcaagaagaatggatttgaaacttccggtagagaagctctttacaatggaataacc
ggtgaaaggattgaagctgaagtcttcataggtgttgcattctaccagaaactgcatcac
atgacatctgacaaagtctacgcaaggtcaaggggaccagtacaggtactcacaaggcag
ccaacagaaggaagagcaagagaaggtggtctcagatttggtgagatggaaagagattgc
ctcatagcacacggagcagcacttgcacttaaagaaagacttctggacgaatcagataag
tacgaagcaatagtatgtgccaactgtggaatgatagcaatatacgataaaataagggat
aaaacctactgttcactctgtggagaatcagaaacattccctgtggaaatatcatacgca
ttcaaattactactcgatgaactcaagagcctttgcatattcccaaaactggtaatggaa
gacaaagcataa
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