Methanobacterium congolense: MCBB_1347
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Entry
MCBB_1347 CDS
T04503
Symbol
rpoD
Name
(GenBank) DNA-directed RNA polymerase subunit D
KO
K03047
DNA-directed RNA polymerase subunit D [EC:
2.7.7.6
]
Organism
mcub
Methanobacterium congolense
Pathway
mcub03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mcub00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MCBB_1347 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcub03021
]
MCBB_1347 (rpoD)
Enzymes [BR:
mcub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MCBB_1347 (rpoD)
Transcription machinery [BR:
mcub03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MCBB_1347 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Fer4_7
Fer4
Fer4_10
Fer4_9
Fer4_6
Fer4_21
Fer4_16
Fer4_2
RNA_pol_L_2
Fer4_15
HcgF
Fer4_17
Fer4_8
Fer4_4
Motif
Other DBs
NCBI-ProteinID:
SCG85905
UniProt:
A0A1D3L2W9
LinkDB
All DBs
Position
I:complement(1413064..1413855)
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AA seq
263 aa
AA seq
DB search
MDITIKKKEDNQMVFVIEGINVPFINAIRRICTVEVPTIAIETVEIIKNDAKIFDEALAH
RMGLIPLTTDLESMVPASECDCEDHCPRCSVSLLLKEKGPKTVYSKDLKSQDPQVKPVFD
TIPILKLKEGEEVELEAIAQLGIGLEHAKWQPTTSCAYKYYPKITIDKEKCEECAKCADA
CPRGILEFDEKKNEVKILDIENCSTCKTCVNTCESGAITVESEEGKFIFRIETDGSLSPE
EILTRACDILSEKSDKIIEFCES
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggatataactataaaaaagaaggaagacaaccagatggtgtttgtaattgaaggtatt
aacgtgcccttcataaatgccataagaaggatctgcacagttgaagttcccaccatagca
attgaaacagtggaaatcattaaaaatgatgcaaaaatattcgacgaagcactggcacat
agaatgggattgatacctctcacaacagatcttgagtcaatggtaccagcatcagaatgt
gactgtgaagaccattgcccacgctgcagtgtttccctacttttaaaggaaaaaggccca
aaaacagtttactccaaggacttaaaatcacaggacccacaggtaaaaccagtatttgac
acaattccaattctcaaactcaaggaaggagaagaagttgaacttgaggcaatagcacaa
ctgggaattggacttgaacatgcaaaatggcagccaacaacatcctgtgcatacaagtac
tatccaaaaataacaatcgacaaggaaaaatgtgaggaatgcgccaaatgtgcagatgca
tgcccaaggggaatactcgaattcgatgagaagaaaaacgaggtaaagatcctggacata
gagaactgctcaacatgcaagacatgcgtcaacacatgtgaatccggtgcaatcacagtc
gaaagtgaagaaggcaaattcatattccgaattgaaacagatggatcactgtcccctgaa
gaaattctaaccagggcatgtgatatactgtcagaaaaatctgataagatcattgaattc
tgtgaatcataa
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