Entry |
|
Symbol |
holA
|
Name |
(GenBank) DNA polymerase III subunit delta
|
KO |
|
Organism |
mcui Mangrovibacillus cuniculi
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:mcui00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G8O30_08215 (holA)
03430 Mismatch repair
G8O30_08215 (holA)
03440 Homologous recombination
G8O30_08215 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:mcui03032]
G8O30_08215 (holA)
03400 DNA repair and recombination proteins [BR:mcui03400]
G8O30_08215 (holA)
Enzymes [BR:mcui01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G8O30_08215 (holA)
DNA replication proteins [BR:mcui03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G8O30_08215 (holA)
DNA repair and recombination proteins [BR:mcui03400]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G8O30_08215 (holA)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(1608942..1609961)
|
AA seq |
339 aa
MIAFWKSLQKEAPAPIYLIYGKESYLIGETKNRMMIHFVEEESRDFNVSIYDMEETPIEV
ALSDAETLPFFGERKVIFIERPHFLTSEKSKSKVEHDLDTLLQYIQSPSPYASVVFLAQY
EKLDERKKVTKLLKKQGVVYEASLLNADELTNWVNQSCAEAAFSIQPQAIELLLYRSNFQ
LQTVVNELAKLMLYAQDQQRITYDMVEDLTPRSLEQNVFELVECTVNGEVSKALRIYHDL
RKMNEEPLKLLALLAGQFRLMYQVKALLQQGYGQPQIAKQIGVHPFRVKLAAGKVKDFPA
ERLQMIMTLLAEADLDMKRSTKPKDMILELLIVKFGTSS |
NT seq |
1020 nt +upstreamnt +downstreamnt
atgattgcattttggaaatcgcttcaaaaagaagcaccagcaccaatttatttaatatat
ggaaaagaatcttatctaataggtgaaacgaaaaatcgaatgatgattcattttgtggaa
gaagagtctcgtgacttcaatgtgtccatctatgatatggaagaaacaccaatagaagtt
gctttaagtgatgcagaaacgttgcctttctttggtgaacgtaaagtgatttttattgaa
agacctcatttcttaacgtcggaaaaatcaaagtcaaaagtggagcatgatttagatact
ctacttcagtatattcaatctccatctccgtatgcttctgttgtattccttgctcaatat
gagaagttagatgaaagaaaaaaagtcacaaaactgttaaaaaagcaaggagttgtgtat
gaggcttctttgctaaacgcagatgaattgactaattgggtaaaccaatcttgtgcagaa
gcggcattttctattcagccgcaagcgatagaacttttattatatcgatcaaactttcaa
cttcaaactgttgtaaatgaattggcaaaactaatgttgtatgcgcaagatcaacaacgc
attacgtatgacatggtagaagacttaacgccaagatcactagaacaaaatgtgtttgag
ttagtagaatgtacggtaaatggagaagtatcaaaagcgctacgaatttatcatgatttg
aggaaaatgaatgaagaaccattaaaattattagcattacttgctggtcaatttcgactg
atgtatcaagtaaaagcgttattacaacaaggatatggacagccccaaattgccaaacaa
attggtgttcatccctttagggtaaaattagcagccgggaaagtgaaagattttccagca
gagagacttcaaatgattatgactttactggcagaagcagatttagatatgaagcgctcg
acaaagcccaaagatatgatcttagaactacttattgtaaagtttggtacctcttcataa |