Mangrovibacillus cuniculi: G8O30_14325
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Entry
G8O30_14325 CDS
T07913
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mcui
Mangrovibacillus cuniculi
Pathway
mcui03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mcui00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
G8O30_14325 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcui03021
]
G8O30_14325 (rpoB)
03400 DNA repair and recombination proteins [BR:
mcui03400
]
G8O30_14325 (rpoB)
Enzymes [BR:
mcui01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
G8O30_14325 (rpoB)
Transcription machinery [BR:
mcui03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
G8O30_14325 (rpoB)
DNA repair and recombination proteins [BR:
mcui03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
G8O30_14325 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QPC48026
UniProt:
A0A7S8CDS4
LinkDB
All DBs
Position
2836076..2839630
Genome browser
AA seq
1184 aa
AA seq
DB search
MTGQLVQYGRHRQRRSFARISEVLELPNLIEIQTASYDWFLEEGLREMFRDISPIEDFTG
NLSLEFIDYSLGDPKYSVEESKERDVTFSAPLRVKVRLVNKETGEVKDQDVFMGDFPLMT
ETGTFVINGAERVIVSQLVRSPSVYFSGKIDKNGKRGYTATVIPNRGAWLEYETDAKDVV
YVRIDRTRKLPVTVLLRALGFGSDQEIIDLIGDNEYIRNTLEKDNTESTEKALLEIYERL
RPGEPPTVESAKSLLISRFFDPKRYDLANVGRYKMNKKLHIKNRLFNQTLAETLVDPETG
EILCEKGTTLDRRTLDKLIPKLEEGVNFKSLTPVAGVLEDDVTLQSIKIFAPNEEGEKAI
NVIGNAFIDEEVKNVTPADIISSISYFFNLLHEVGDTDDIDHLGNRRLRSVGELLQNQFR
IGLSRMERVVRERMSIQDTATITPQQLINIRPVIASIKEFFGSSQLSQFMDQTNPLAELT
HKRRLSALGPGGLTRERAGFEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSFAKVNRFG
FIETPYRRVDPDTGKVLDKFDYLTADEEDNYVVAQANARLGEDGSFLDENIVARFRGENT
VVKRERVDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLLNPEAPIVGTG
MEYVSAKDSGAAVICKHEGIVEHVQANEVSVRRIEIVDGQEVKGNLDRYRMQKFIRSNQG
TCYNQRPIVSTGDRVVKGEILADGPSMEKGELALGRNVLVGFMTWEGYNYEDAIIMSERL
VKDDVYTSIHIEEYESESRDTKLGPEEITRDIPNVGEDALRNLDERGIIRVGAEVKDGDL
LVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIVLDVKVFNREDGDEL
PPGVNQLVRVYIVQKRKISEGDKMAGRHGNKGVISRIMPEEDMPYLPDGTPIDIMLNPLG
VPSRMNIGQVLELHLGMAARYLGIHVASPVFDGAREEDVWSTIEEAGMSRDAKTVLYDGR
TGEPFDNRVSVGVMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVW
ALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGENVPEPGVPESFKVLIKELQSLGMD
VKMLTSDEQEIELRDTEDDEQQDADTLNLAGDREEVSEPVGMKE
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggtcaacttgttcagtatggacgacaccgccaacgtagaagttttgcgcgcatc
agtgaagtcttagaattaccaaatctaattgaaatccaaaccgcttcgtatgattggttc
ttagaagaaggtttacgtgaaatgttccgtgacatttcaccgatcgaagactttactgga
aatctttcattagagttcatcgattatagtttaggtgatccgaagtattcagtggaagaa
tcaaaagaacgtgatgttacgttctcggctccacttcgcgtaaaggttcgtcttgttaac
aaagaaacaggcgaagttaaagatcaagatgtctttatgggagatttcccactaatgaca
gaaacgggtacattcgttattaacggagcagaacgtgttatcgtatctcagttggttcgt
tctccaagtgtgtactttagtggaaaaattgataaaaacggaaaacgtggctatacagct
actgtaattccaaaccgtggtgcttggttagagtacgaaacggatgcaaaagatgtagta
tatgttcgtattgaccgtacacgtaaactaccagttaccgtgttgttacgtgctttaggt
tttggtagtgatcaagagatcattgatttaataggagataacgagtacatccgtaataca
cttgaaaaagataatacggaaagtacagaaaaagcgttacttgaaatctatgagcgtcta
cgtccaggtgagccacctacagtagaaagcgcaaagagcctattaatctcacgcttcttt
gacccaaaacgctatgacttagcaaacgttggtcgttacaagatgaacaaaaagcttcat
attaagaatcgcctatttaaccaaactcttgcagaaacgttagtggatcctgagactggt
gagattctatgtgaaaaaggtacaacgttagatcgtcgtactttagataaattgattcct
aaattagaagaaggggttaacttcaaatctcttactcctgttgcaggtgtattagaagac
gatgtaactcttcaatctattaaaatcttcgctccgaatgaagaaggcgaaaaagctatc
aatgttattggtaatgccttcattgacgaagaagtgaaaaatgtcacaccagctgatatc
atttcttctatctcatacttcttcaacttactacatgaggttggagatacggatgatatt
gaccacttaggtaaccgtcgtctacgttcagtaggagagcttctacaaaatcagttcaga
attggactttctcgtatggagcgtgtagtacgtgagcgtatgtctatccaagacacagct
actattacaccacaacagttaattaatattagacctgtaattgcttctattaaagagttc
tttggtagttcgcagttatctcagttcatggatcaaacgaatccattagcagaattaacg
cataagcgtcgtctatcagcattaggaccaggtggtttaacacgtgaacgtgctggattc
gaagtacgtgacgttcattattctcactatggtcgtatgtgcccaattgaaacacctgag
ggaccaaacattggtctaatcaactcattatcttcattcgcaaaggttaatcgcttcggg
tttattgaaacaccttatcgtcgtgttgatccagacacaggtaaagtactagataaattt
gattacttaacagctgatgaagaagataactatgtagttgcacaggcaaatgctcgtcta
ggtgaagatggatcattccttgatgagaacatcgtagctcgtttccgtggagaaaacact
gttgttaaaagagaacgcgttgactacatggacgtatctcctaaacaggtagtatctgca
gcaacagcttgtatcccgttcttagaaaacgatgactccaaccgtgcgctaatgggagcg
aacatgcaacgacaagcagtacctctattaaatccagaagcacctattgttggaactggt
atggagtatgtatctgcaaaagactctggtgctgcagtaatctgtaagcatgaaggtatt
gttgagcatgttcaagcaaacgaagtgtcggttagacgcattgaaattgtagatggtcaa
gaagtaaaaggtaacttagatcgttaccgtatgcaaaaattcatccgttccaaccaaggt
acatgttataaccaacgtcctatcgttagcactggagatagagtggttaaaggtgaaatc
cttgcagatggtccttcaatggaaaaaggtgaattggctctaggtcgtaacgtattagta
ggatttatgacttgggaaggttataactacgaagatgcgattatcatgagcgagcgctta
gtaaaagacgatgtatacacatctattcatattgaagagtatgagtctgagtctcgtgat
acgaagctaggacctgaagaaattacacgtgatatccctaatgtaggggaagatgcgctt
cgtaacttagatgagcgcggaatcatccgtgttggagcagaagtaaaagatggtgatcta
ttagttggtaaggtaactcctaaaggtgttacggaattaacagcagaagaacgtcttcta
catgcaatcttcggagaaaaagctcgtgaagttcgtgatacgtcattacgtgtaccacat
ggtggtggtggaatcgtattggatgtaaaagtctttaatcgtgaagatggagatgagctt
cctccaggtgttaaccaattagtgcgcgtatatatcgttcagaaacgtaagatctctgaa
ggagataaaatggccggacgacatggtaacaaaggtgttatctctcgtatcatgccagaa
gaagatatgccgtatctaccagatggtacgccaatcgatatcatgttaaacccactaggg
gtaccttcacgtatgaacatcggtcaggtgcttgagttacacttaggaatggctgcacgc
tacctaggtattcatgttgcttcaccggtattcgatggtgcgcgagaagaagatgtttgg
tcaacgattgaagaagcaggaatgtcacgtgatgcgaaaacagtcctatacgatggccgt
acgggtgaaccgttcgataaccgtgtatctgttggagttatgtatatgatcaaacttgct
cacatggttgatgacaaactacatgctcgttctacaggaccatattcactagttacgcaa
caaccacttggtggtaaagcgcaatttggtggacagcgttttggtgagatggaggtatgg
gcactagaagcgtacggtgctgcatatacactacaagaaatcttaacagttaaatccgat
gacgttgttggacgtgtgaaaacatacgaagcaattgttaaaggtgaaaacgttcctgaa
ccaggagttcctgaatcattcaaagtattgattaaagagcttcaaagtttaggtatggac
gttaagatgttaacaagcgatgaacaagaaattgaacttcgcgacacagaagatgatgag
caacaagatgcggatacacttaaccttgctggtgatcgtgaagaagtatctgagccagtt
ggaatgaaagagtaa
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