Moraxella cuniculi: NCTC10297_00820
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Entry
NCTC10297_00820 CDS
T06646
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mcun
Moraxella cuniculi
Pathway
mcun03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mcun00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC10297_00820 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcun03021
]
NCTC10297_00820 (rpoC)
03400 DNA repair and recombination proteins [BR:
mcun03400
]
NCTC10297_00820 (rpoC)
Enzymes [BR:
mcun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCTC10297_00820 (rpoC)
Transcription machinery [BR:
mcun03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCTC10297_00820 (rpoC)
DNA repair and recombination proteins [BR:
mcun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCTC10297_00820 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
VEG12871
UniProt:
A0A3S5EFW0
LinkDB
All DBs
Position
1:852079..856302
Genome browser
AA seq
1407 aa
AA seq
DB search
MKDLLDIMKGPADGGVKEFDSIQISLASPEAIKSWSHGEVKKPETINYRTFKPERDGLFC
AKIFGPVKDFECLCGKYKRRKFQGIICEKCGVEVTAAKVRRDRMGHIELASPVAHIWFLK
SLPSRIGLLLDITLRDIERVLYFESYIVTDPGMTSLDKYQLLDDEEYFTALEQYGDEFVA
KMGAEAIQDLLKDIDVDGEIDELRAAIPQTGSETKLKKMSKRLQLLESFRDSNNKPEWMV
MTVLPVLPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKRLLELNAPDIIVRNEKRM
LQEAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVG
PTLRLHQCGLPKKMALELFKPFTYAKLLQNGIASTIKAAKKMVEREEPAVWDMLAMVIRE
HPVLLNRAPTLHRLGLQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLTLEAQL
EARALMMSTNNILSPANGEPIIVPSQDVVLGLYYISRSHVAARGEGMIFSTVNEALRAIG
SEDLSVNAKIKVRVAETILDEKTGEKVSRSTIYDTVAGRLLIWNIMPEGMAFDECNTEMT
KKNISKLLNSCYRKLGVKESVLFADHLMYLGFAQATLSGISIGMEDMVIPPTKKQIVDAA
DAEVRDIEHQFEQGFVTAGERYNKVVDIWARTSDKIANAMMENLSTDEVVNADGQAEQQK
SFNSIYMMADSGARGSATQIRQLAGMRGLMAKPDGSIIETPIKANFREGLTVLQYFISTH
GARKGLADTALKTANSGYLTRRLVDVAQDLVITQDDCHTQAGQRMAPVIDGGEIVERLGD
RVLGRVAASDVVNADGEVVVAAGTLIDERLVEKLDTNAIDEVYVRSVITCEAAQGVCAKC
YGRDLARGHLVNIGESVGVMAAQSIGEPGTQLTMRTFHVGGAASAASVDNSVSVGNAGSV
RFHNMKTVEHTDGHLVIVSRSAEIGVADSQGRERERYKVPYGSSILVRDGDAVEAGRVIA
KWDPHTHPIITEFSGTARFSDITDGMTATVKVDEITGVSSFEILPSKDRPGIAKDLRPAI
ILDTDSGKEVVYFLPNDTIIRVADGEQVAAGSVLGRVPQATSGTKDITGGLPRVADLFEA
RRPKDHAIMAEISGVVSFGKETKGKNRFIITAEDGTVHEELIPKWRQINVFEGETVERGE
VVSDGPQNPHDILRLKGETALANYIVNEVQEVYRLQGVKINDKHIEVIVRQMLRKVEVID
GGDSSYFKGDQAEYSKIRALNAELQENNKFPVQYERQLLGITKASLATESFISAASFQET
TRVLTAAAVMGKVDDLSGLKENVVVGRLIPAGTGLAYHQNRQRKAQNAADSQVQADDLLA
ETLLGDTAGSVEDSFAKAFADELGSQE
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagatttattagatatcatgaaaggccctgctgatggcggtgtaaaagagtttgac
agcattcaaatttctttggcatcacctgaggccatcaaatcttggtcgcatggcgaggta
aaaaagcctgaaaccatcaattaccgcacctttaagcctgagcgtgatggtttgttctgt
gccaaaatctttggacctgtgaaagattttgaatgcttgtgtggcaaatacaaacgccgc
aaattccaaggcattatttgtgaaaagtgtggcgttgaggtaactgctgccaaagtgcgt
cgtgatcgcatgggtcatattgagcttgctagccctgtggctcatatttggttcttgaaa
tctttgccaagccgtattggtttgttgcttgatattactctgcgtgatattgaacgcgtg
ctatattttgagagctatatcgtaaccgatccgggcatgactagccttgataagtatcaa
ttgcttgatgacgaagagtattttactgcccttgagcaatatggcgatgaatttgttgcc
aagatgggtgcagaagccattcaagacttgctaaaagacattgatgttgatggtgagatt
gatgagctgcgtgccgccattccgcaaacaggctctgaaaccaagctaaagaaaatgtca
aaacgcttgcaattgcttgagtcattccgtgattcaaacaacaagcctgaatggatggtg
atgacagtattgcctgtattgccacctgatttgcgtccattggtaccgcttgaaggtggt
cgttttgccacttcagatttgaacgatttataccgccgtgttatcaaccgtaacaaccgc
ttgaagcgtttgcttgaattgaacgcacctgatatcatcgtgcgaaatgagaagcgtatg
ctacaagaggcggtagatgctttgcttgacaatggtcgccgtggccgtgctattacgggc
tcaaacaagcgtccgctaaaatcattggcagacatgattaaaggtaagcaaggtcgtttc
cgccaaaacttgctgggtaaacgagtggattattcgggtcgttcggtgattgtggtcggt
ccgacattgcgtctgcaccagtgtggtttgccaaagaaaatggcacttgagctatttaaa
ccatttacctatgccaagttattacaaaatggcattgccagcaccatcaaggctgccaaa
aaaatggttgagcgtgaagagccagcagtttgggatatgttggcgatggtcattcgtgag
catccagtcctgctaaaccgtgcaccaaccctgcaccgtttgggcttacaggcgtttgag
cctgtgctgattgaaggtaaagcaatccagctacaccccttggtctgtgcggcatttaac
gctgactttgacggcgaccaaatggcggtgcatgtgccattgacactagaagcacagcta
gaagctcgtgcattgatgatgtctaccaataacatcttgtctccagcgaacggcgagccg
attatcgtaccatcgcaagatgtggtattgggcttgtattatatcagccgtagccatgtg
gcagctcgcggtgagggcatgatttttagcacagtcaatgaggcattgcgtgccatcggt
tcagaggatttgagcgtcaatgcaaaaatcaaagtgcgtgttgccgagaccatcttggac
gaaaaaactggcgaaaaggtcagccgttcaaccatttacgacactgttgcgggtcgtttg
ctgatttggaatatcatgcctgaaggcatggcgtttgatgagtgcaacactgagatgacc
aaaaagaacatctcaaaacttttaaactcttgctatcgtaaacttggcgtaaaagaatca
gtattgtttgccgaccatttgatgtatctaggttttgctcaagcaaccttgtctggtatt
tcaattggtatggaagacatggtaattccgccaaccaaaaaacaaatcgttgatgctgct
gatgccgaagtgcgtgatattgaacatcagtttgagcaaggctttgtaaccgcaggtgag
cgatacaataaggttgttgatatctgggcaagaacatcggacaagattgccaatgcaatg
atggaaaacctatcaacagatgaagttgtcaatgctgatggtcaagctgagcaacaaaaa
tcatttaactcaatctacatgatggcggattctggtgctcgtggtagtgcaacgcagatt
cgtcagctggctggtatgcgtggcttgatggcaaagccagatggctcgattatcgaaacg
ccaattaaggcaaacttccgtgaaggtttgaccgttttgcagtactttatctcaacacac
ggtgcgcgtaaaggcttggctgatactgccctaaaaactgcaaactcaggttatctgact
cgtcgtttggttgatgtggcacaagacttggtaattacccaagatgactgtcatacacaa
gcaggtcagcgtatggcacctgtgattgatggtggcgaaatcgttgagcgtttgggcgat
cgtgtattgggtcgtgtggcagcatccgatgttgtcaatgccgatggtgaggtggttgtt
gcagctggcactttgattgatgagcgtctggtcgaaaaacttgacaccaatgccattgat
gaagtgtatgtgcgttcggtcatcacttgtgaagctgctcaaggcgtatgtgcaaaatgc
tatggccgtgatttggcacgaggtcatttggtaaatatcggcgaatctgtcggcgttatg
gctgcccagtcaatcggtgaaccaggcacacagctgaccatgcgtactttccatgtgggg
ggtgccgcttcggcagcctcggtggacaatagcgtctctgttggtaatgcaggttcggtt
cgtttccacaacatgaaaacggtagagcataccgatgggcatttggtcatcgtatctcgt
tctgcggagattggcgtggcggacagccaaggccgtgagcgtgaacgctacaaagtgcct
tatggctcaagcatcttggtgcgtgatggcgatgcagtagaggcaggtcgggtgattgcc
aaatgggatccgcatacccacccaatcatcaccgaattctctggtacggctcgctttagt
gatattaccgatggtatgactgcaacggtcaaggttgatgaaataacaggcgttagctct
tttgagattctgccaagcaaagatcgccctggtattgccaaagatttacgcccagcgatt
attcttgataccgattctggcaaagaagtggtgtatttcttgccaaacgacaccattatc
cgtgtggcagatggcgaacaagttgcagcaggttcggtcttgggtcgtgtaccgcaagca
acctcaggcaccaaagatattacgggcggtctgccacgcgtggctgatttgttcgaagct
cgccgtccaaaagatcatgccatcatggcagagattagcggtgtggtgagttttggtaaa
gaaaccaaaggcaaaaaccgctttatcatcactgccgaagatggcactgtccatgaggaa
ttaattccaaaatggcgtcaaatcaatgtctttgagggtgaaacggttgagcgtggtgaa
gttgtgtcagatgggccacaaaacccgcatgatattttgcgtctaaaaggcgaaacagca
cttgccaattatattgtcaatgaagtgcaagaggtatatcgcttgcagggcgtaaaaatc
aatgataagcacatcgaagtgattgtgcgtcagatgttacgcaaggttgaggtgattgat
ggcggtgattcgagctactttaagggcgaccaagcagagtactcaaaaatccgtgcattg
aatgctgaattgcaggagaataacaaattccctgtgcagtacgaacgccaattgctgggc
atcaccaaagcaagtctggcaaccgaaagctttatttcggcagcatcattccaagaaacc
acacgcgtcttgactgccgctgcggtcatgggcaaggttgatgatttgagcggtctaaaa
gaaaatgtcgtggtgggtcgtttgattccagcaggtacaggattggcttatcatcaaaac
cgccaacgcaaagcacaaaatgctgctgacagtcaggttcaggcagatgatctgctggca
gagacattgcttggtgataccgctggcagtgttgaggacagctttgccaaggcatttgct
gacgaacttggttcacaagagtaa
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integrated database retrieval system
