Mycobacterium canettii CIPT 140070008: BN43_20347
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Entry
BN43_20347 CDS
T02420
Name
(GenBank) Putative transcriptional regulatory protein (probably LuxR-family)
Organism
mcv
Mycobacterium canettii CIPT 140070008
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
Guanylate_cyc
Sigma70_r4_2
HTH_23
AAA_16
HTH_38
AAA_22
NB-ARC
HTH_29
nSTAND1
HTH_24
HTH_40
nSTAND3
AAA_25
HTH_7
Sigma70_ECF
DUF4807
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
CCK54837
LinkDB
All DBs
Position
complement(980764..984027)
Genome browser
AA seq
1087 aa
AA seq
DB search
MSRLLPTGTVTLLLADVEESTHLWQMCPEDMATAIAHLDHTVSEAITNHGGVQPVKRYEG
DSFVAAFTRASDAAACALDLQRTSLAPIRLRIGLHTGEVQLRDELYVGPTINRTARLRDL
AHGGQVVLSAATGDLVTGRLPADAWLVDLGRHPLRGLPRPEWVMQLCHPDIREKFPPLRT
AKSSPTSILPAQFTTFVGRRAQISEVRALLGQNRLVTLCGTGGVGKTRLAIQIASASELR
DGLCFVDLAPITESGIVAATAARAVGLPDQPGRSTMDSLRRFIGNRRMLMVLDNCEHLLD
ACAALVVELLGACPELTILATSREPIGMAGEITWRVPSMSITDEAVELFADRASRVQPGF
TIANHNAAAVGEICRRLDGIPLAIEFAAARVRSMSPLEIADGLDDCFRLLAGGVRGAVQR
QQTLRASIDWSHALLTETEQILFRRLAPFVGGFDLAAVRAVAAGSDLDPFSVLDQLTLLV
DKSLVVADDCQGRTRYRLLETVRRYALEKLGDSGEADVHARHRDYYTALAASLNTPADND
HQRLVARAETEIDNLRAAFAWSRENGHITEALQLASSLQPIWFGRAHLREGLSWFNSILE
DQRFHRLAVSTAVRARALADKAMLSTWLATSPVGATDIIAPAQQALAMAREVGDPAALVR
ALTACGCSSGYNAEAAAPYFAEATDLARAIDDKWTLCQILYWRGVGTCISGDPNALRAAA
EECRDLADTIGDRFVSRHCSLWLSLAQMWAGNLTEALELSREITAEAEASNDVPTKVLGL
YTQAQVLAYCGASAAHAIAGACIAAATELGGVYQGIGYAAMTYAALAAGDVTAALEASDA
ARPILRAQPDQVTMHQVLMAQLALAGGDAIAARQFANDAVDATNGWHRMVALTIRARVAT
ARGEPELARDDAHAALACGAELHIYQGMPDAMELLAGLAGEVGSHSEGVRLLGAAAALRQ
QTRQVRFKIWDAGYQASVTALREAMGGEDFDRAWAEGAALSTDEAIAYAQRGRGERKRPA
RGWGSLTPTERDVVRLVSEGLSNKDIAKRLFVSPRTVQTHLTHVYAKLGLASRVQLVDEA
ARRGSPS
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagattgctgccgacgggcacggtgacattgctcttagccgacgtcgaggaatcg
acccacctatggcaaatgtgcccagaggacatggcgaccgccatcgcacacttggatcac
actgtgtcggaagctatcacgaatcacggtggggtgcagccggtcaaacggtacgagggt
gatagcttcgttgcggctttcactcgcgctagcgatgccgctgcatgcgcgctggatctg
cagcggacctcgctcgcgccgatccgactacgtataggtcttcatacaggcgaggtacag
ttgcgcgacgaactctatgtcggccccactatcaaccggacggcgcgtctccgcgatttg
gcacacgggggtcaggttgtcctgtcagctgcgacaggtgatttagtgactggccggctc
ccagccgatgcatggcttgtcgatctcggccgccacccgctgcgcggtctacctcgtccc
gaatgggtcatgcagttgtgccaccccgacattcgcgaaaagtttcccccactgcgcacg
gccaaatccagcccgacatcgattctcccggcgcagttcaccacatttgtgggccgccgt
gcgcaaataagcgaggtgcgggcactgttggggcagaaccggctcgtgacgctatgcgga
accggcggtgtcggcaagacccgtctggcaatccagatcgcgagtgcatccgaacttcgc
gacggtttgtgctttgtcgatctggccccgatcactgaatccgggatcgtcgcagccacg
gctgcgcgcgccgtgggtctgcccgatcagccgggccgttcaaccatggatagtcttcgc
cgattcatcggcaatcgccgcatgctcatggtgttggacaactgtgaacatcttctcgat
gcgtgcgcagcgttggtcgttgagctattgggggcctgtccggagctgacgatcttagcg
actagccgggagccgatcgggatggccggcgagatcacctggcgcgtaccgtcgatgtcg
ataaccgacgaagcagtcgaattgtttgctgaccgagccagccgagttcagcccgggttc
accatcgccaatcacaacgctgcggccgtcggcgagatctgccggcggctagacggcata
ccgctggcgatcgagttcgctgccgcacgggtgcggtcgatgtcaccgctcgagattgcc
gacggtctggacgactgtttccggctgttggccggcggtgtgcggggcgcggtgcagcgc
cagcagacacttcgcgcctcgatcgattggtcgcatgcactgctgaccgagaccgagcaa
atcttgtttcggcgactggcgccatttgtcggcgggttcgacctcgccgcggtgcgggcg
gtcgccgccggtagcgacctggatccgttttcggtgcttgatcagctgaccctgctggta
gacaagtcgctggtggtggccgacgactgccagggccgcacgaggtaccggctgctggaa
acggtgcgtcggtacgcgctggaaaaactgggcgactccggcgaggccgatgtgcacgca
cgtcaccgtgactactacacggcgctggccgcctcactcaacactcctgcggacaacgat
caccaacggcttgtcgcccgggctgagaccgagatcgacaacctgcgcgccgcgttcgcc
tggagccgggaaaatggccatatcaccgaagcgttacagctcgcatcttcgctgcaacca
atctggttcgggcgggcgcacctgcgcgaggggttgtcctggttcaactcgatcctggaa
gaccaaaggttccaccggctcgctgtgtcaacagcagtacgggcgcgagcgctcgctgac
aaggcaatgctcagtacctggctggccaccagtccggtaggcgccaccgacatcatcgct
cccgcacaacaagcgctggcgatggcacgtgaggtgggcgaccccgccgcgttggtgcgg
gcgctcaccgcctgcggctgtagcagtggctacaacgcggaggccgctgcgccctatttc
gccgaagcgaccgacctggcacgcgctattgacgacaaatggacgctgtgtcaaatcctc
tactggcggggggtggggacctgcatatcaggtgacccgaatgctttgcgagccgcggca
gaagaatgccgcgacctggccgacaccatcggcgaccggttcgtctcacgtcactgcagc
ttgtggcttagtttggcgcagatgtgggctggcaatctgaccgaggccctcgagctatcc
agagaaatcactgccgaggccgaggcatccaacgatgtgccgacaaaggttctcggccta
tatacccaagcccaggtgctggcgtattgcggcgccagtgcggcccacgccatagccggg
gcgtgcattgcagccgcgacggagttaggcggtgtgtaccaaggcattggttacgcggcg
atgacgtacgccgcgctggccgccggtgatgtcacggcagcgctcgaggccagcgacgcg
gcgcggccgattcttagggcccagcccgaccaggtgaccatgcaccaggtcctgatggcg
cagttagccctggcaggaggtgatgcgatcgccgcacgacagttcgccaacgacgccgtc
gatgcgaccaatgggtggcaccgaatggtggcgttgacaatacgcgcgcgcgtagccacc
gcacggggcgaaccagaactggcgcgcgatgatgctcatgctgcgctggcgtgcggcgcc
gagctgcacatctaccagggcatgccagatgccatggaactcctcgccggcctggccggc
gaggtcggcagtcactccgaaggtgtccgccttctcggtgccgcagccgcccttcggcaa
cagacacgtcaggtccgcttcaagatttgggatgccggctaccaggcctcggtgacggcg
cttcgtgaggcgatgggcggtgaggatttcgaccgcgcctgggccgagggggccgccttg
tccaccgacgaggcgatcgcatatgcacaacgcggtcgcggtgaacgcaaacgaccggcc
cgcgggtggggctcgttgaccccgaccgaacgcgacgtcgtgcggttggtcagcgagggg
ttatccaacaaggacattgcaaaacggcttttcgtctcgccgcgcactgtgcaaacccac
ctcacccacgtctacgccaaacttggcttggcctcccgagtacaactggtggacgaggcg
gcacgccgcggctcaccctcgtga
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