Mycobacterium canettii CIPT 140070008: BN43_20426
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Entry
BN43_20426 CDS
T02420
Symbol
uvrD
Name
(GenBank) Putative ATP-dependent DNA helicase II UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mcv
Mycobacterium canettii CIPT 140070008
Pathway
mcv03420
Nucleotide excision repair
mcv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BN43_20426 (uvrD)
03430 Mismatch repair
BN43_20426 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcv03400
]
BN43_20426 (uvrD)
Enzymes [BR:
mcv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BN43_20426 (uvrD)
DNA repair and recombination proteins [BR:
mcv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BN43_20426 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
BN43_20426 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
CarD_TRCF_RID
DUF3013
Motif
Other DBs
NCBI-ProteinID:
CCK54902
LinkDB
All DBs
Position
1057022..1059337
Genome browser
AA seq
771 aa
AA seq
DB search
MSVHATDAKPPGPSPADQLLDGLNPQQRQAVVHEGSPLLIVAGAGSGKTAVLTRRIAYLM
AARGVGVGQILAITFTNKAAAEMRERVVGLVGEKARYMWVSTFHSTCVRILRNQAALIEG
LNSNFSIYDADDSRRLLQMVGRDMGLDIKRYSPRLLANAISNLKNELIDPHQALAGLTED
SDDLARAVASVYDEYQRRLRAANALDFDDLIGETVAVLQAFPQIAQYYRRRFRHVLVDEY
QDTNHAQYVLVRELVGRDSNDGVPPAELCVVGDADQSIYAFRGATIRNIEDFERDYPDTR
TILLEQNYRSTQNILSAANSVIARNAGRREKRLWTDAGAGELIVGYVADNEHDEARFVAE
EIDALAEGSEITYNDVAVFYRTNNSSRSLEEVLIRAGIPYKVVGGVRFYERKEIRDIVAY
LRVLDNPGDAVSLRRILNTPRRGIGDRAEACVAVYAENTGAGFGDALVAAAQGKVPMLNT
RAEKAIAGFVEMLDELRGRLDDDLGELVEAVLERTGYRRELEASTDPQELARLDNLNELV
SVAHEFSTDRENAAALGPDDEDVPDTGVLADFLERVSLVADADEIPEHGAGVVTLMTLHT
AKGLEFPVVFVTGWEDGMFPHMRALDNPTELSEERRLAYVGITRARQRLYVSRAIVRSSW
GQPMLNPESRFLREIPQELIDWRRTAPKPSFSAPVSGAGRFGSPRPSPTRSGASRRPLLV
LQVGDRVTHDKYGLGRVEEVSGVGESAMSLIDFGSAGRVKLMHNHAPVTKL
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgcacgcgaccgacgccaagcctcccggtccatccccagcggaccaactgctc
gacggcctcaacccgcaacagcgccaggcggtggtgcatgagggttcgccgctgctgatc
gtcgcgggcgcgggttcgggaaagaccgcggtgttgacccgccggatcgcctatctgatg
gcggcccgcggcgtcggggtgggccagattctggccatcaccttcaccaacaaagccgcc
gccgagatgcgcgaacgggtggtgggcctggttggggagaaggcccggtacatgtgggtg
tcgacgtttcactccacctgcgtgcgcatcctgcgcaaccaggcggcgctgatcgagggc
ctcaactccaacttttcgatctatgacgccgacgattcgcggcggttgctgcagatggtg
ggccgtgacatgggcctagacatcaagcggtactcgccgcgactgctggccaacgccatc
tccaacctgaagaacgagttgatcgacccgcatcaggcgctggccggcttaacggaggac
tccgatgacctggcgcgcgcagtggcgtcggtttatgacgaataccagcggcggctgcgc
gcggccaacgcgctggacttcgacgacctgatcggcgagaccgtcgcggtgctgcaggcc
ttcccacagatcgcccagtattaccgtcggcggttccggcatgtcctggttgacgaatac
caggacaccaaccacgcccagtacgtattggtgcgcgagctggtcggccgcgacagcaac
gacggtgttccccccgccgagttgtgcgtcgtcggggatgccgaccagtcgatctatgcg
ttccgcggcgccaccatccgcaacatcgaagacttcgaacgtgactaccccgacaccaga
accattctgctggaacagaattaccgctcgacgcagaacatcctgtcggcggccaactcg
gtgatcgcccgtaacgcgggacgccgggagaagcggttgtggaccgacgccggcgctggc
gagttgatcgttggctacgtcgccgacaacgagcacgacgaggcccggttcgtggccgag
gagatcgatgcgctcgccgagggtagcgagatcacctacaacgatgtcgccgtcttctac
cgcaccaacaactcgtcgcggtcactggaagaggtgctgatccgcgccggtattccgtac
aaagtcgttgggggagtgcgcttttacgagcgcaaggagattcgcgacatcgtcgcctac
ctgcgcgtgctggacaacccgggcgacgcggtcagcctgcggcgcatccttaacaccccg
cgccgcggtatcggggatcgcgccgaggcgtgcgtggcggtgtacgccgagaacaccggc
gccggcttcggtgacgcgctcgtcgccgcggcccaaggcaaagtaccgatgctgaatacc
cgggcggagaaggcgatcgcgggtttcgtcgagatgctcgacgagctgcgcggccgcctc
gacgacgacctgggggagctggtcgaggcggtgttggaacgcaccggataccgccgcgag
ctggaagcgtccaccgatccacaggagttggcccgcctggacaacctcaacgaattagtg
agcgtcgcacacgaattcagtaccgaccgggagaatgccgccgcacttggcccagacgac
gaagacgtccccgacaccggtgtgctggcggattttctggaacgggtgtcgctggtcgcc
gacgccgatgagatcccggagcatggcgcgggcgtggttaccttgatgaccttgcacacc
gccaagggtttggagttcccggtggtgtttgtgaccggctgggaggacgggatgttcccg
cacatgcgggcgttggacaacccgaccgagttgtccgaggagcggcggctggcctatgtc
ggcatcacccgcgcccggcagcggttgtacgtgagccgggcgatcgtgcgttcgtcttgg
ggccagccgatgctcaacccggagtcgcggtttctgcgggaaatcccgcaggagctcatc
gactggcggcgcaccgccccgaagccgtcgttcagtgcgccggtgagcggcgccggtcgg
ttcggtagcccgcgtccatcaccgacccgctcgggggcgagcaggcgcccgctgctggtg
cttcaggtcggcgaccgcgtaacccatgacaaatacggcctgggccgcgtcgaggaggtc
tccggtgtcggcgaatcggcgatgtcgctgatcgacttcggcagcgcggggcgggtgaag
ctgatgcacaaccacgccccggtcaccaagctctga
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