Mycobacterium canettii CIPT 140070008: BN43_30673
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Entry
BN43_30673 CDS
T02420
Symbol
dnaE
Name
(GenBank) Putative DNA polymerase III (alpha chain) DnaE1 (DNA nucleotidyltransferase)
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mcv
Mycobacterium canettii CIPT 140070008
Pathway
mcv03030
DNA replication
mcv03430
Mismatch repair
mcv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BN43_30673 (dnaE)
03430 Mismatch repair
BN43_30673 (dnaE)
03440 Homologous recombination
BN43_30673 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcv03032
]
BN43_30673 (dnaE)
03400 DNA repair and recombination proteins [BR:
mcv03400
]
BN43_30673 (dnaE)
Enzymes [BR:
mcv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BN43_30673 (dnaE)
DNA replication proteins [BR:
mcv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BN43_30673 (dnaE)
DNA repair and recombination proteins [BR:
mcv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BN43_30673 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
CCK55540
LinkDB
All DBs
Position
1773623..1777177
Genome browser
AA seq
1184 aa
AA seq
DB search
MSGSSAGSSFVHLHNHTEYSMLDGAAKITPMLAEVERLGMPAVGMTDHGNMFGASEFYNS
ATKAGIKPIIGVEAYIAPGSRFDTRRILWGDPSQKADDVSGSGSYTHLTMMAENATGLRN
LFKLSSHASFEGQLSKWSRMDAELIAEHAEGIIITTGCPSGEVQTRLRLGQDREALEAAA
KWREIVGPDNYFLELMDHGLTIERRVRDGLLEIGRALNIPPLATNDCHYVTRDAAHNHEA
LLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQIWDDEVPGACDSTLLIAERVQSYADVW
TPRDRMPVFPVPDGHDQASWLRHEVDAGLRRRFRSGPPDGYRERAAYEIDVICSKGFPSY
FLIVADLISYARSAGIRVGPGRGSAAGSLVAYALGITDIDPIPHGLLFERFLNPERTSMP
DIDIDFDDRRRGEMVRYAADKWGHDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADR
ITKALPPAIMAKDIPLSGITDPSHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNA
GVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPACEAIGLLKMDFLGLRNLTIIGDA
IDNVRANRGIDLDLESVPLDDKATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTGFEDVV
AVIALYRPGPMGMNAHNDYADRKNNRQAIKPIHPELEEPLREILAETYGLIVYQEQIMRI
AQKVASYSLARADILRKAMGKKKREVLEKEFEGFSDGMQANGFSPAAIKALWDTILPFAD
YAFNKSHAAGYGMVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLP
PDVNESGLNFASVGQDIRYGLGAVRNVGANVVGSLLQTRNDKGKFTDFSDYLNKIDISAC
NKKVTESLIKAGAFDSLGHARKGLFLVHSDAVDSVLGTKKAEALGQFDLFGSNDDGTGTA
DPVFTIKVPDDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVPN
DAQVRVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSSYGADIVDDAVVLV
NAKVAVRDDRIALIANDLTVPDFSNAQVDRPLAVSLPTRQCTFDKVSALKQVLARHPGTS
QVHLRLISGDRITTLALDQSLRVTPSPALMGDLKELLGPGCLGS
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgagcggttcatctgcggggtcctccttcgtgcacctgcacaaccacaccgagtattcg
atgctggacggtgccgcgaagatcacgcccatgctcgccgaggtggagcggctggggatg
cccgcggtggggatgaccgaccacggaaacatgttcggtgccagcgagttctacaactcc
gcgaccaaggccgggatcaagccgatcatcggcgtcgaggcatacatcgcgcccggctcg
cggttcgacacccggcgcatcctgtggggtgaccccagccaaaaggccgacgacgtctcc
ggcagcggctcctacacgcacctgacgatgatggccgagaacgccaccggcctgcgcaac
ctgttcaagctgtcctcgcatgcttccttcgagggccagctgagcaagtggtcgcgcatg
gacgccgagctcatcgccgaacacgccgagggcatcatcatcaccaccggatgcccgtcg
ggggaggtgcagacccgcctgcggctcggccaggatcgggaggcgctcgaagccgcggcg
aagtggcgggagatcgtcggaccggacaactacttccttgagctgatggaccacgggctg
accatcgaacgccgggtccgtgacggtctgctcgagatcggacgcgcgctcaacattccg
ccgctggccaccaatgactgccactacgtcacccgcgacgccgcccacaatcacgaggcg
ctgttgtgcgtgcagaccggcaagaccctctcggatccgaatcgcttcaagttcgatggt
gacggctactacctgaagtcagccgccgagatgcgccagatctgggacgacgaagtgccg
ggcgcgtgtgactccaccttgttgatcgccgaacgggtgcagtcctacgccgacgtgtgg
acaccgcgcgaccggatgcccgtgtttccggtgcccgatgggcatgaccaggcgtcctgg
ctgcgtcacgaggtggacgccgggcttcgccggcgatttcggtccggtccgccggacggg
taccgcgagcgcgccgcctacgagatcgacgtcatctgctccaaaggtttcccatcgtac
tttctgatcgtcgccgacctgatcagctacgcgcggtcggcgggcatacgggtgggtccc
ggccgcggctcggccgccggctcgctggtcgcctacgcgctgggcatcaccgacatcgac
ccgattccacacggtctgctgttcgagcggttcctcaaccccgagcgcacctcgatgccc
gacatcgatatcgacttcgacgaccggcgccgcggtgagatggtgcgctacgcagccgac
aagtggggccacgaccgggtcgcgcaggtcatcaccttcggcaccatcaaaaccaaagcg
gcgctgaaggattcggcgcgaatccactacgggcagcccgggttcgccatcgccgaccgg
atcaccaaggcgttgccgccggcgatcatggccaaagacatcccgctgtctgggatcacc
gatcccagccacgaacggtacaaggaggccgccgaggtccgcggcctgatcgaaaccgac
ccggacgtacgcaccatctaccagaccgcacgcgggttggaaggcctgatccgcaacgcg
ggtgtgcacgcctgcgcggtgatcatgagcagcgagccgctgactgaggccatcccgttg
tggaagcggccgcaggacggggccatcatcaccggctgggattacccggcgtgcgaggcc
atcggtctgctgaaaatggacttcctgggcctgcggaacctgacgatcatcggcgacgcg
atcgacaacgtcagggccaacaggggtatcgacctcgacctggaatccgtgccgctggac
gacaaggccacctatgagctgctgggccgcggcgacaccctgggcgtgttccagctcgac
ggcgggcccatgcgcgacctgctgcgccgcatgcagccgaccgggttcgaagacgtcgtc
gccgttatcgcgctgtaccggcccggcccgatgggcatgaacgcacacaacgactatgcc
gaccgcaagaacaaccggcaggccatcaaacctattcacccggaactcgaagaaccgctg
cgcgagatcctcgccgagacctacggcctcatcgtctatcaagagcagatcatgcgcatc
gcgcagaaggtggcgagctactcgttggcccgcgccgacattctacgcaaggccatgggc
aagaagaaacgcgaggtgctggagaaggagttcgagggcttctccgatggcatgcaggcc
aacgggttctctccggcggccatcaaggcgctgtgggacaccatcctgccgttcgctgac
tacgcgttcaacaagtcacatgccgccggctacggcatggtgtcctactggacggcctac
ctcaaggccaactatcccgccgagtacatggccggtctgttgacgtcggtcggcgacgat
aaagacaaggccgcggtttatctggccgactgccgcaagctcggcatcaccgtgctcccg
cccgacgtcaacgaatctggcttgaacttcgcatcggtcggccaagacatccgctacggg
ctgggcgcggtgcgcaacgttggcgctaatgtcgtgggctcgttgctccaaacccgcaac
gacaagggcaagttcaccgacttttcggactacctgaacaagatcgacatctcggcgtgc
aacaagaaggtgaccgaatcgctgatcaaggcgggtgcgttcgactcgctggggcatgcc
cgcaagggtcttttcctggtgcacagcgatgcggtggactcggtgctgggcaccaagaag
gccgaggcactggggcagttcgatctcttcggcagcaatgatgatgggaccggcaccgca
gatcccgtgttcaccatcaaggtgcccgatgatgagtgggaggacaaacacaaactcgcc
ctagagcgcgagatgctgggactgtacgtctcggggcatcccctcaacggtgtggcacac
ttgctggctgcccaggtcgacaccgcgatcccagcgatcctcgacggcgatgtccccaac
gatgcccaagtgcgggtgggcggcatcctggcgtcggtgaaccggagggtcaacaaaaac
ggaatgccatgggcttcagctcaattggaggatctcacgggcggcatcgaggtgatgttc
ttcccgcacacctactccagctatggtgccgacatcgtcgacgatgccgtcgtgctggtc
aacgccaaggtggcggtccgtgacgaccgcatcgcattgatcgccaatgacctcacagtg
cccgacttttccaacgcccaggtggaccggccgctggcggtcagcttgcccacccggcag
tgcacctttgacaaggtgagtgcgctcaaacaggtgttggcgcgccaccccggcacctcg
caggtgcatctgcggctcatcagcggagaccggatcaccacgctggcgcttgatcagtcg
ttgcgggtgacgccgtcgccggcgttgatgggtgacctcaaggagctgctcggccctgga
tgtctagggagttag
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integrated database retrieval system
