Mycobacterium canettii CIPT 140070008: BN43_60198
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Entry
BN43_60198 CDS
T02420
Symbol
uvrD
Name
(GenBank) Putative ATP-dependent DNA helicase II UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mcv
Mycobacterium canettii CIPT 140070008
Pathway
mcv03420
Nucleotide excision repair
mcv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BN43_60198 (uvrD)
03430 Mismatch repair
BN43_60198 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcv03400
]
BN43_60198 (uvrD)
Enzymes [BR:
mcv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BN43_60198 (uvrD)
DNA repair and recombination proteins [BR:
mcv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BN43_60198 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
BN43_60198 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
CCK57249
LinkDB
All DBs
Position
complement(3600483..3602585)
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AA seq
700 aa
AA seq
DB search
MSIASDPLIAGLDDQQREAVLAPRGPVCVLAGAGTGKTRTITHRIASLVASGHIAAGQVL
AVTFTQRAAGEMRSRLRALDAAARTGSGVGAVQALTFHAAAYRQLRYFWSRVIADTGWQL
LDSKFAVVARAASRTRLHASTDDVRDLAGEIEWAKASLIGPEEYVTAVAAARRDPPLDAA
QIAAVYSEYEALKARGDGVTLLDFDDLLLHTAAAIENDAAVAEEFQDRYRCFVVDEYQDV
TPLQQRVLSAWLGDRDDLTVVGDANQTIYSFTGASPRFLLDFSRRFPDAAVVRLERDYRS
TPQVVSLANRVIAAARGRVAGSKLRLSGQREPGPVPSFHEHSDEPAEAATVAASIARLIA
SGTPPSEVAILYRVNAQSEVYEEALTQAGIAYQVRGGEGFFNRQEIKQALLALQRVSERD
TDAALSDVVRAVLAPLGLTAQPPVGTRARERWEALTALAELVDDELAQRPALQLPGLLAE
LRRRAEARHPPVVQGVTLASLHAAKGLEWDAVFLVGLADGTLPISHALAHGPNSEPVEEE
RRLLYVGITRARVHLALSWALSRSPGGRQSRKPSRFLNGIAPQTRADPVPGTSRRNRGAA
ARCRICNNELNTSAAVMLRRCETCAADVDEELLLQLKSWRLSTAKEQNVPAYVVFTDNTL
IAIAELLPTDDAALIAIPGIGARKLEQYGSDVLQLVRGRT
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatagccagcgacccattgattgccgggctggacgaccagcagcgcgaagccgta
ctggctccgcgtggaccggtgtgcgtgctggccggtgccggaaccggcaagacccgcacc
atcactcaccggatcgcttcgctggtcgcgagcggtcacatcgccgccgggcaggtgctg
gctgtgacattcacccagcgcgcggcgggcgaaatgcgcagccggttgcgcgcactcgac
gccgcggcacggaccggttcgggcgtcggcgctgtgcaggcgctgacctttcacgcggcc
gcgtatcgccagctgcggtacttctggtcgcgcgtaatcgctgacaccggctggcagctg
ctggacagcaagttcgccgtggtggcccgcgccgccagccgcaccaggctgcacgccagc
accgatgatgtgcgtgacctggccggcgagatcgagtgggccaaggcgtccctgatcggc
cccgaggagtatgtgaccgcagtggcggccgcacgccgagaccccccgttggacgccgcg
caaatcgcggctgtctactccgaatacgaggcgctcaaggcccgcggcgacggcgtcacc
ttacttgacttcgacgacctgttgctgcacaccgcggccgcgattgaaaacgacgccgcg
gtggccgaggagttccaggaccggtaccggtgtttcgtcgtggacgagtaccaggacgtc
acccccctgcagcagcgggtgctctcggcctggttgggtgatcgggacgacctgaccgtc
gtcggcgacgccaaccagaccatctactcgtttaccggggcttcgcctcgtttcctactc
gacttctcgcggcggttcccggacgccgcggtggtgcggctggagcgtgattaccggtca
actccgcaggtggtgtcattggctaaccgggtgatcgccgccgcccggggccgtgttgcc
ggcagcaagctacggttgtccggccagcgtgagccgggtccggtcccgtcgttccatgag
cattccgacgagcccgccgaggctgccacggtggcggcgtcaatcgcccggttaatcgca
tcgggcactccgccatccgaggtagccattctctaccgagtcaatgcgcagtcagaggtt
tatgaagaggcgttgacccaggcgggtatcgcctatcaggttcgcggtggcgaggggttt
ttcaaccgtcaggaaatcaagcaggcgttgcttgccttacagcgtgtgtccgaacgtgat
accgatgccgcgttgtccgacgtggttcgcgcggtgctcgcaccactggggctgacggca
caaccgccggtcggcacccgcgccagggaacgctgggaagcgctcaccgcgctggccgag
ctggtcgacgacgagctggcgcagcgtcccgcactgcagctgcccggcctgcttgccgag
ctacgccggcgggcggaggcgcggcacccaccggtggtgcagggcgtcacgctggcctca
ctgcacgccgccaagggactggaatgggacgcggtgttcctggtcggattggctgacggc
acgctgcccatctcacatgcgctggcacacggccccaatagcgagcccgtagaggaagag
cgtcggctgctctacgtcggaatcacacgggcccgagtccatttggcgctcagctgggcg
ctatcacggtccccgggcgggcgccagagccgcaagccctcgcggttcctcaacggcatt
gcgccgcagacgcgcgccgatccggtgccgggcacatcccgacgcaaccggggcgccgca
gcgcgctgccggatctgtaacaacgagctgaacacttcggcggccgtcatgctgcggcgg
tgtgagacgtgtgcagccgacgtcgacgaggagttgttgttgcagctcaagtcctggcgt
ctgagcaccgccaaggaacagaacgtccccgcctatgtcgttttcaccgacaacaccctg
atcgcgatcgccgagctgctacctaccgacgacgcggcgctgatcgcgatccccggcatc
ggtgcccgcaagctggaacaatacggatcggacgtgctgcagctggttcgcggtcggacc
tga
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