Microbacterium aurantiacum: A8L33_04670
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Entry
A8L33_04670 CDS
T04340
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mcw
Microbacterium aurantiacum
Pathway
mcw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A8L33_04670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcw03019
]
A8L33_04670
03400 DNA repair and recombination proteins [BR:
mcw03400
]
A8L33_04670
Enzymes [BR:
mcw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A8L33_04670
Messenger RNA biogenesis [BR:
mcw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A8L33_04670
DNA repair and recombination proteins [BR:
mcw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A8L33_04670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
ResIII
HHH
Motif
Other DBs
NCBI-ProteinID:
ANG84773
UniProt:
A0A0M8MR48
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All DBs
Position
962951..964960
Genome browser
AA seq
669 aa
AA seq
DB search
MPRPVEPADPGVPFDDAPPFDDVPPDEWAPPEDDGWMPPPEPYGGSGAPPAAAPPGPGEP
PVRDFTGTTPADVLREVYGYDAFRGDQAAIIDQVTGGGDAVVLMPTGGGKSVCYQVPALV
RPGTGLVVSPLIALMHDQVDALVANGVRAAYLNSTQDAAERRRVEQAYVSGGLDLLYVAP
ERLNTDSARRLLGQGRLSVIAIDEAHCVSQWGHDFRPDYLGLGDLAERFPDVPRIALTAT
ATPATHREISERLQLPGARHFVSSFDRPNIQYRIEAKSDPRRQLTAFIRSQPEGAAGIVY
ALSRKSVEQTAEYLSAQGIDALPYHAGLPAETRAANQSRFLREDGVVMVATIAFGMGIDK
PDVRFVAHIDLPKSVEGYYQETGRAGRDGQPAVAWMAYGLGDVVQQRRMIDQSPGDRTYK
MRLGQHLDAMLALCETVGCRRQNLLGYFGEASTPCGNCDTCIEAPDTWDGLVPAQKLLST
IVRLQRERNQAFGAGHLIDILRGASTDRIRQQGHDALATYGLGADLSDQDWRSVIRQLLA
RGILVARGEYGTLALGESAGGVLRGETPVPLRRDTIGRTSAPRVRRAAAPDGVAAGDVPL
FEALRAWRAGVARELGVPAYIVFGDATLRALAQRRPSSLADLDGVPGIGAKKREAYGDAV
LEVVAEQAA
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtcctgtcgaacccgccgacccgggggtgccgttcgacgacgccccgccgttc
gacgacgtcccaccggacgagtgggcgccgcccgaggacgacggctggatgccgcccccc
gagccgtacggagggtcgggtgccccgcccgcagccgcgccgcccggtcctggcgagccc
ccggtccgcgacttcaccggcaccacgcccgccgacgtcctccgcgaggtctacgggtac
gacgcgttccgcggcgatcaggccgcgatcatcgatcaggtgaccggcggcggtgacgcg
gtcgtgctcatgccgaccggcggcggtaagagcgtctgctaccaggtgcccgcgctcgtc
cggcccggcaccggcctcgtggtcagccccctcatcgccctcatgcacgatcaggtcgac
gcgctcgtggccaacggcgtgcgggcggcgtacctcaactccacgcaggatgccgccgag
cggcgccgcgtcgaacaggcgtatgtgagcggcgggctcgacctcctctacgtcgccccc
gagcggctgaacaccgactcggcccgccgccttctcgggcagggccggctcagcgtgatc
gccatcgacgaggcccactgcgtctcgcagtgggggcacgacttccgccccgactacctc
ggcctcggcgatctcgccgagcgcttccccgacgtcccgcggatcgccctgaccgcgacc
gcgacgcccgcgacccaccgggagatctccgagcggctccagctcccgggtgcccgccac
ttcgtctccagcttcgaccgtcccaacatccagtaccgcatcgaggcgaagtccgacccg
cgccgtcagctgaccgcgttcatccgttcgcagcccgagggagccgcaggcatcgtctac
gcgctgagccggaagtcggtcgaacagaccgccgagtacctcagcgcccagggcatcgac
gccctgccttaccacgcgggtcttcccgcggagacgcgggcggccaaccagtcccgcttc
ctccgcgaggacggcgtcgtgatggtcgccaccatcgcgttcgggatgggcatcgacaag
cccgacgtccgcttcgtcgcccacatcgacctgccgaagtctgtggagggctactaccag
gaaaccggtcgcgccggccgcgacggccagcccgccgtggcgtggatggcctacggcctc
ggcgacgtcgtgcagcagcggcgcatgatcgaccagtcgcccggcgaccgcacctacaag
atgcgactcggccagcacctcgacgccatgctggccctctgcgagacggtcggatgccgc
cgccagaacctcctcggctacttcggtgaagcctccaccccgtgcggcaactgcgacacg
tgcatcgaggcccccgacacgtgggacggactcgtccccgcgcagaagctgctgtcgacc
atcgtgcgcctccagcgcgagcgcaaccaggcgttcggcgcgggccacctgatcgacatc
ctccgcggcgcctcgaccgaccgcatccgtcagcaggggcacgatgccctggcgacctac
gggctcggtgccgatctgtcggaccaggattggcggagcgtcatccgtcagcttctcgcc
cgcggaatcctggtcgcccgcggcgagtacggcaccctcgcgctgggtgagagtgccggg
ggcgtgctccgcggcgagacccccgtgcctctccgtcgcgacaccatcggtcgcacgtcg
gcgccgcgcgtccgacgcgctgccgcgcccgacggggtggcggcgggagatgtcccgctg
ttcgaggcgctccgtgcctggcgggcgggggtcgcccgtgaactcggcgtcccggcctac
atcgtcttcggcgacgccacccttcgcgcgctcgcgcagcggcgtccgtcctcgctcgcc
gatctcgacggggttcccggcatcggggcgaagaagcgcgaagcgtacggcgacgcggtc
ctggaggtcgtcgccgaacaggccgcgtga
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